用深度学习实现脑磁化率源分离,提升成像精度与效率
χ-sepnet: Deep neural network for magnetic susceptibility source separation
- 基于深度网络χ-sepnet,融合多回波GRE与SE数据进行磁化率分离
- χ-sepnet-R2'在定量评估中表现最优,比传统方法显著减少伪影
- 仅需GRE数据的χ-sepnet-R2*适合临床推广,适用于多种疾病研究
磁化率源分离(χ-分离)是一种先进的定量磁化率成像(QSM)方法,可分别估计脑内顺磁性与抗磁性源分布。该方法利用可逆横向弛豫(R2'=R2*-R2)补充频率偏移信息以估算磁化率浓度,但需额外耗时的数据采集获取R2。为解决此问题,本文提出深度学习网络χ-sepnet,并构建两种新管道:χ-sepnet-R2'(输入为多回波GRE与多回波SE)和χ-sepnet-R2*(仅需多回波GRE)。χ-sepnet使用多个头方位数据训练,生成无条状伪影的标签,产出高质量χ-分离图。在健康受试者中进行定性与定量评估,并对多发性硬化患者病灶特征进行视觉分析。所提管道生成的分离图能更清晰勾勒脑结构,显著降低伪影,相比传统正则化重建方法有明显改善。定量分析显示,χ-sepnet-R2'表现最佳,其次为χ-sepnet-R2*。对250个病灶评估,两者在顺磁性(99.6%)与抗磁性(98.4%)特征上高度一致。其中,仅需多回波GRE数据的χ-sepnet-R2*展现出广泛临床与科研应用潜力,但仍需进一步验证于多种疾病与病理状态。
原文摘要 · Abstract (English)
Magnetic susceptibility source separation ($χ$-separation), an advanced quantitative susceptibility mapping (QSM) method, enables the separate estimation of para- and diamagnetic susceptibility source distributions in the brain. The method utilizes reversible transverse relaxation (R2'=R2*-R2) to complement frequency shift information for estimating susceptibility source concentrations, requiring time-consuming data acquisition for R2 in addition R2*. To address this challenge, we develop a new deep learning network, $χ$-sepnet, and propose two deep learning-based susceptibility source separation pipelines, $χ$-sepnet-R2' for inputs with multi-echo GRE and multi-echo spin-echo, and $χ$-sepnet-R2* for input with multi-echo GRE only. $χ$-sepnet is trained using multiple head orientation data that provide streaking artifact-free labels, generating high-quality $χ$-separation maps. The evaluation of the pipelines encompasses both qualitative and quantitative assessments in healthy subjects, and visual inspection of lesion characteristics in multiple sclerosis patients. The susceptibility source-separated maps of the proposed pipelines delineate detailed brain structures with substantially reduced artifacts compared to those from conventional regularization-based reconstruction methods. In quantitative analysis, $χ$-sepnet-R2' achieves the best outcomes followed by $χ$-sepnet-R2*, outperforming the conventional methods. When the lesions of multiple sclerosis patients are assessed, both pipelines report identical lesion characteristics in most lesions ($χ$para: 99.6% and $χ$dia: 98.4% out of 250 lesions). The $χ$-sepnet-R2* pipeline, which only requires multi-echo GRE data, has demonstrated its potential to offer broad clinical and scientific applications, although further evaluations for various diseases and pathological conditions are necessary.
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