arXiv:2409.16612q-bio.QMcs.AI2024-09被引 15

构建含真实瑕疵的12导联心电图图像数据集,助力算法自动识别与还原纸质心电图。

ECG-Image-Database: A Dataset of ECG Images with Real-World Imaging and Scanning Artifacts; A Foundation for Computerized ECG Image Digitization and Analysis

  • 用开源工具生成含噪、褶皱、污渍等真实缺陷的合成心电图图像
  • 覆盖35,595张带标签图像,源自977+1000份原始心电数据
  • 适合研究心电图数字化、图像去噪及医疗影像算法鲁棒性

我们提出ECG-Image-Database,一个大规模多样化的心电图(ECG)图像数据集,由真实世界扫描、成像和物理缺陷生成。通过开源Python工具ECG-Image-Kit,从原始心电时间序列生成12导联心电图打印图像,包含数字与物理层面的失真,如噪声、褶皱、污渍和视角偏移。该工具应用于来自PTB-XL数据库的977个12导联心电记录和来自埃默里医疗中心的1,000个记录,生成高保真合成图像。这些图像经程序化失真处理,并通过浸泡、染色、霉变等物理方式处理后,在不同光照条件下进行扫描与摄影,产生真实世界缺陷。最终数据集包含35,595张软件标注的心电图图像,涵盖多种成像质量与失真类型。数据集提供图像对应的原始时间序列作为真实标签,为心电图数字化与分类的机器学习模型开发提供基准。图像质量从清晰干净纸张的扫描到破损纸张的模糊照片不等,支持更泛化的数字化算法研发。该数据集旨在填补纸质与非数字心电图计算机化分析的关键空白,是训练鲁棒深度学习模型以实现图像转时间序列的基础。该数据集已用于PhysioNet Challenge 2024心电图图像数字化与分类任务。

原文摘要 · Abstract (English)

We introduce the ECG-Image-Database, a large and diverse collection of electrocardiogram (ECG) images generated from ECG time-series data, with real-world scanning, imaging, and physical artifacts. We used ECG-Image-Kit, an open-source Python toolkit, to generate realistic images of 12-lead ECG printouts from raw ECG time-series. The images include realistic distortions such as noise, wrinkles, stains, and perspective shifts, generated both digitally and physically. The toolkit was applied to 977 12-lead ECG records from the PTB-XL database and 1,000 from Emory Healthcare to create high-fidelity synthetic ECG images. These unique images were subjected to both programmatic distortions using ECG-Image-Kit and physical effects like soaking, staining, and mold growth, followed by scanning and photography under various lighting conditions to create real-world artifacts. The resulting dataset includes 35,595 software-labeled ECG images with a wide range of imaging artifacts and distortions. The dataset provides ground truth time-series data alongside the images, offering a reference for developing machine and deep learning models for ECG digitization and classification. The images vary in quality, from clear scans of clean papers to noisy photographs of degraded papers, enabling the development of more generalizable digitization algorithms. ECG-Image-Database addresses a critical need for digitizing paper-based and non-digital ECGs for computerized analysis, providing a foundation for developing robust machine and deep learning models capable of converting ECG images into time-series. The dataset aims to serve as a reference for ECG digitization and computerized annotation efforts. ECG-Image-Database was used in the PhysioNet Challenge 2024 on ECG image digitization and classification.

心电图图像生成医学影像数据集

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