arXiv:2411.00696cs.LGcs.AI2024-11ACL被引 9

跨模态时间模式发现提升电子病历临床预测准确率

CTPD: Cross-Modal Temporal Pattern Discovery for Enhanced Multimodal Electronic Health Records Analysis

  • 通过共享初始时序模式并用槽注意力优化,挖掘多模态数据中的共现时间特征
  • 在MIMIC-III数据集上,48小时院内死亡预测和24小时表型分类均优于现有方法
  • 适合关注医疗时序建模与多模态融合的临床研究者和系统开发者

整合数值时间序列与自由文本临床记录等多模态电子病历数据,在预测临床结局方面具有巨大潜力。然而,以往工作主要关注单个样本内的时序交互与模态融合,忽视了患者间关键的时间模式。例如,心率或血压的异常趋势可能预示健康恶化或危急事件;临床文本也常反映这些模式。跨模态识别此类时间模式对提升预测准确性至关重要,但仍是挑战。为此,我们提出跨模态时间模式发现(CTPD)框架,高效提取多模态电子病历中的有意义跨模态时间模式。该方法引入共享初始时序模式表示,并利用槽注意力生成时序语义嵌入。为确保学习到的模式具备丰富的跨模态时序语义,设计基于对比的TPNCE损失以实现跨模态对齐,同时引入两种重建损失保留各模态核心信息。在MIMIC-III数据库上,针对48小时院内死亡和24小时表型分类两个临床关键任务的评估表明,该方法显著优于现有方法。

原文摘要 · Abstract (English)

Integrating multimodal Electronic Health Records (EHR) data, such as numerical time series and free-text clinical reports, has great potential in predicting clinical outcomes. However, prior work has primarily focused on capturing temporal interactions within individual samples and fusing multimodal information, overlooking critical temporal patterns across patients. These patterns, such as trends in vital signs like abnormal heart rate or blood pressure, can indicate deteriorating health or an impending critical event. Similarly, clinical notes often contain textual descriptions that reflect these patterns. Identifying corresponding temporal patterns across different modalities is crucial for improving the accuracy of clinical outcome predictions, yet it remains a challenging task. To address this gap, we introduce a Cross-Modal Temporal Pattern Discovery (CTPD) framework, designed to efficiently extract meaningful cross-modal temporal patterns from multimodal EHR data. Our approach introduces shared initial temporal pattern representations which are refined using slot attention to generate temporal semantic embeddings. To ensure rich cross-modal temporal semantics in the learned patterns, we introduce a contrastive-based TPNCE loss for cross-modal alignment, along with two reconstruction losses to retain core information of each modality. Evaluations on two clinically critical tasks, 48-hour in-hospital mortality and 24-hour phenotype classification, using the MIMIC-III database demonstrate the superiority of our method over existing approaches.

多模态学习电子病历时间序列临床预测

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