arXiv:2411.06842eess.IVcs.CV2024-11中稿 · publication at the…被引 4

用简单强度建模和分组提升胎儿脑部MRI分割的跨域泛化能力。

Evaluating Synthetic Data Generation for Domain Generalization in Fetal Brain MRI Segmentation

  • 采用高斯混合模型模拟图像强度,优于复杂物理仿真。
  • 按强度对组织类别分组,使模型在不同设备上表现更稳定。
  • 首次实现对T1w模态的鲁棒分割,适合多中心医学影像研究。

胎儿脑组织分割对神经发育研究至关重要,但受限于数据异质性和标注稀缺。领域随机化(DR)通过合成带随机伪影、对比度和分辨率的训练图像,成为单源领域泛化的有效策略。本文评估多种DR合成数据方法,重点测试我们提出的FetalSynthSeg框架。结果表明,基于高斯混合的强度建模优于复杂物理仿真,而按强度对组织类别进行聚类可显著提升跨域鲁棒性。在来自四个中心共348名胎儿(0.55-3T场强,T1w与T2w对比)的数据上,FetalSynthSeg在多个FeTA 2024测试集上达到80-85的Dice分数,首次实现对dHCP-T1w数据集的80 Dice鲁棒分割。相比BOUNTI、nnU-Net集成及FeTA 2024冠军方法,其精度相当或更优,且跨域适应性强。代码、模型权重及预置Docker镜像已公开。

原文摘要 · Abstract (English)

Fetal brain tissue segmentation from magnetic resonance imaging (MRI) is crucial for studying neurodevelopment, but remains challenging due to data heterogeneity and limited annotations. Domain randomization (DR) has recently emerged as a promising strategy for single-source domain generalization by synthesizing training images with randomized artifacts, contrast, and resolution. In this work, we investigate how to maximize the out-of-domain (OOD) generalization of DR-based methods. We evaluate several synthetic data generation strategies for DR, with a particular focus on our recently proposed framework, FetalSynthSeg. We show that simple Gaussian mixture-based intensity modeling outperforms more complex physics-based simulations, and that intensity clustering (subdividing tissue classes based on intensity) improves OOD robustness. Evaluated on 348 fetal subjects from four sites spanning 0.55-3T and both T1w and T2w contrasts, FetalSynthSeg reaches state-of-the-art performance on several FeTA 2024 testing datasets (80-85 Dice score) and, for the first time, offers robust segmentation on modalities other than T2w for fetal brain segmentation (80 Dice on dHCP-T1w dataset). Compared with state-of-the-art methods such as BOUNTI, nnU-Net ensemble, and the FeTA 2024 winner, FetalSynthSeg delivers comparable or superior accuracy while maintaining strong robustness across domain shifts. Our code, model weights, and Docker image ready for easy inference are available at https://hub.docker.com/r/vzalevskyi/fetalsynthseg.

医学图像领域泛化合成数据胎儿MRI

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