arXiv:2411.07097cs.CV2024-11NeurIPS被引 5

构建可控且真实的病理图像数据集,用于精准评估分割模型的不确定性

Arctique: An artificial histopathological dataset unifying realism and controllability for uncertainty quantification

  • 用Blender生成3D场景,可独立控制图像和标签的不确定性
  • 含5万张带精确掩码的渲染图像,支持多种不确定性条件测试
  • 适合医学图像分割与不确定性量化研究者使用

不确定性量化(UQ)对可靠图像分割至关重要。然而,尽管新方法不断涌现,缺乏公认的基准限制了系统性比较与评估:现有UQ方法通常在过于简单的玩具数据集或无法区分真实不确定性的复杂真实数据集上测试。为兼顾可控性与复杂性,我们提出Arctique——一个基于结肠组织病理图像生成的程序化数据集。选择病理图像的原因在于其结构复杂、外观多变,构成挑战性分割任务,且在医学诊断中广泛应用,高质量UQ具有重要意义。我们建立基于Blender的3D场景生成框架,支持内在噪声操控。Arctique包含50,000张渲染图像及精确掩码,以及模拟噪声标签。通过独立控制图像与标签中的不确定性,我们有效评估了几种常用UQ方法的表现。因此,Arctique成为复杂多对象环境中评估和推进UQ技术的关键资源,弥合了真实感与可控性之间的差距。所有代码公开,支持复现、可控调整及新场景生成。

原文摘要 · Abstract (English)

Uncertainty Quantification (UQ) is crucial for reliable image segmentation. Yet, while the field sees continual development of novel methods, a lack of agreed-upon benchmarks limits their systematic comparison and evaluation: Current UQ methods are typically tested either on overly simplistic toy datasets or on complex real-world datasets that do not allow to discern true uncertainty. To unify both controllability and complexity, we introduce Arctique, a procedurally generated dataset modeled after histopathological colon images. We chose histopathological images for two reasons: 1) their complexity in terms of intricate object structures and highly variable appearance, which yields challenging segmentation problems, and 2) their broad prevalence for medical diagnosis and respective relevance of high-quality UQ. To generate Arctique, we established a Blender-based framework for 3D scene creation with intrinsic noise manipulation. Arctique contains 50,000 rendered images with precise masks as well as noisy label simulations. We show that by independently controlling the uncertainty in both images and labels, we can effectively study the performance of several commonly used UQ methods. Hence, Arctique serves as a critical resource for benchmarking and advancing UQ techniques and other methodologies in complex, multi-object environments, bridging the gap between realism and controllability. All code is publicly available, allowing re-creation and controlled manipulations of our shipped images as well as creation and rendering of new scenes.

医学图像不确定性量化数据集生成分割

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