系统梳理图神经网络设计与应用,提出高效图池化与分子图生成模型。
Learning From Graph-Structured Data: Addressing Design Issues and Exploring Practical Applications in Graph Representation Learning
- 设计高阶图池化函数,捕捉复杂节点关系提升性能。
- 构建基于GNN的分子图生成模型,可同步学习并生成原子键结构与位置。
- 在多种真实数据集上验证效果,适用于生物医学等场景。
图是描述相互作用元素组成系统的基础形式,广泛用于分子相互作用、社交网络和知识图谱等数据类型。本文全面综述了图表示学习与图神经网络(GNN)的最新进展。GNN专为处理图结构数据而设计,擅长从复杂的关联信息中提取洞察并做出预测,在涉及此类数据的任务中具有重要价值。图表示学习是分析图结构数据的关键方法,支持机器学习、数据挖掘、生物医学和医疗健康等多个领域的下游任务。研究深入探讨了GNN的架构设计及其在解决实际问题中的应用。提出一种配备先进高阶池化函数的GNN,能有效捕捉图结构数据中的复杂节点交互,显著提升其在节点级和图级任务上的表现。同时,设计了一种以GNN为核心框架的分子图生成模型,该模型能学习分子的不变性与等变性特征,并据此同步生成包含原子-键结构与精确原子坐标的分子图。所提模型在多个真实数据集上进行充分实验评估,与现有方法相比展现出更优性能,有效应对多样化现实挑战。
原文摘要 · Abstract (English)
Graphs serve as fundamental descriptors for systems composed of interacting elements, capturing a wide array of data types, from molecular interactions to social networks and knowledge graphs. In this paper, we present an exhaustive review of the latest advancements in graph representation learning and Graph Neural Networks (GNNs). GNNs, tailored to handle graph-structured data, excel in deriving insights and predictions from intricate relational information, making them invaluable for tasks involving such data. Graph representation learning, a pivotal approach in analyzing graph-structured data, facilitates numerous downstream tasks and applications across machine learning, data mining, biomedicine, and healthcare. Our work delves into the capabilities of GNNs, examining their foundational designs and their application in addressing real-world challenges. We introduce a GNN equipped with an advanced high-order pooling function, adept at capturing complex node interactions within graph-structured data. This pooling function significantly enhances the GNN's efficacy in both node- and graph-level tasks. Additionally, we propose a molecular graph generative model with a GNN as its core framework. This GNN backbone is proficient in learning invariant and equivariant molecular characteristics. Employing these features, the molecular graph generative model is capable of simultaneously learning and generating molecular graphs with atom-bond structures and precise atom positions. Our models undergo thorough experimental evaluations and comparisons with established methods, showcasing their superior performance in addressing diverse real-world challenges with various datasets.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。