arXiv:2411.08992eess.IVcs.AI2024-11被引 4

新细胞图像数据集助力机器自动计数,提升分析效率。

IDCIA: Immunocytochemistry Dataset for Cellular Image Analysis

  • 构建多抗体染色细胞图像数据集,含精确位置与计数标注。
  • 五种现有模型均无法达到替代人工计数的准确率。
  • 适合研究细胞图像分析、医疗影像自动化者使用。

我们提出一个新注释的显微细胞图像数据集,以提升机器学习在细胞图像分析中的效果。细胞计数是细胞分析的重要步骤,通常由领域专家手动完成。自动化计数可显著减少繁琐耗时的工作,但需高质量标注数据训练模型。本数据集包含细胞显微图像,每张图像均提供细胞总数及个体位置标注。数据来源于一项研究电刺激调控干细胞分化的长期项目,探索其在神经修复中的应用。相比现有公开数据集,本数据集涵盖更多使用不同抗体(免疫反应蛋白成分)染色的细胞图像,种类更丰富。实验结果表明,所测试的五种现有模型均未能达到可替代人工计数的精度。数据集已发布于 https://figshare.com/articles/dataset/Dataset/21970604。

原文摘要 · Abstract (English)

We present a new annotated microscopic cellular image dataset to improve the effectiveness of machine learning methods for cellular image analysis. Cell counting is an important step in cell analysis. Typically, domain experts manually count cells in a microscopic image. Automated cell counting can potentially eliminate this tedious, time-consuming process. However, a good, labeled dataset is required for training an accurate machine learning model. Our dataset includes microscopic images of cells, and for each image, the cell count and the location of individual cells. The data were collected as part of an ongoing study investigating the potential of electrical stimulation to modulate stem cell differentiation and possible applications for neural repair. Compared to existing publicly available datasets, our dataset has more images of cells stained with more variety of antibodies (protein components of immune responses against invaders) typically used for cell analysis. The experimental results on this dataset indicate that none of the five existing models under this study are able to achieve sufficiently accurate count to replace the manual methods. The dataset is available at https://figshare.com/articles/dataset/Dataset/21970604.

细胞图像数据集自动计数

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