用自监督去噪提升多线圈MRI重建的精度与效率
Robust multi-coil MRI reconstruction via self-supervised denoising
- 利用GSURE实现无需参考图像的自监督去噪预处理
- 在32/22/12dB和24/14/4dB多种信噪比下提升PSNR、SSIM、降低NRMSE
- 适合需要高效训练且无噪声参考数据的MRI深度学习研究者
本文研究将自监督去噪作为预处理步骤,应用于受高斯噪声污染的多线圈MRI数据上训练深度学习(DL)重建方法的效果。用于训练的k空间数据通常为多线圈且固有噪声。尽管基于全采样数据训练的DL方法可实现高质量重建,但获取大规模无噪声数据集不切实际。我们采用广义斯坦无偏风险估计(GSURE)进行去噪。评估了两种基于DL的重建方法:扩散概率模型(DPMs)和基于模型的深度学习(MoDL)。实验基于T2加权脑部及脂肪抑制质子密度膝关节扫描数据,结果表明:在不同加速条件下,使用去噪后的图像而非原始噪声图像训练网络,能显著提升重建质量。在32dB、22dB、12dB信噪比下(脑部)以及24dB、14dB、4dB(膝关节)中,均实现了更低的归一化均方根误差(NRMSE)、更高的结构相似性指数(SSIM)和峰值信噪比(PSNR)。总体表明,去噪是提升各类条件下的DL-MRI重建效能的关键预处理手段,通过提升输入数据质量,使网络训练更有效,或可替代对噪声自由参考图像的需求。
原文摘要 · Abstract (English)
We study the effect of incorporating self-supervised denoising as a pre-processing step for training deep learning (DL) based reconstruction methods on data corrupted by Gaussian noise. K-space data employed for training are typically multi-coil and inherently noisy. Although DL-based reconstruction methods trained on fully sampled data can enable high reconstruction quality, obtaining large, noise-free datasets is impractical. We leverage Generalized Stein's Unbiased Risk Estimate (GSURE) for denoising. We evaluate two DL-based reconstruction methods: Diffusion Probabilistic Models (DPMs) and Model-Based Deep Learning (MoDL). We evaluate the impact of denoising on the performance of these DL-based methods in solving accelerated multi-coil magnetic resonance imaging (MRI) reconstruction. The experiments were carried out on T2-weighted brain and fat-suppressed proton-density knee scans. We observed that self-supervised denoising enhances the quality and efficiency of MRI reconstructions across various scenarios. Specifically, employing denoised images rather than noisy counterparts when training DL networks results in lower normalized root mean squared error (NRMSE), higher structural similarity index measure (SSIM) and peak signal-to-noise ratio (PSNR) across different SNR levels, including 32dB, 22dB, and 12dB for T2-weighted brain data, and 24dB, 14dB, and 4dB for fat-suppressed knee data. Overall, we showed that denoising is an essential pre-processing technique capable of improving the efficacy of DL-based MRI reconstruction methods under diverse conditions. By refining the quality of input data, denoising enables training more effective DL networks, potentially bypassing the need for noise-free reference MRI scans.
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