解决分组数据中系统性缺失特征的选特征难题
MISFEAT: Feature Selection for Subgroups with Systematic Missing Data
- 用异构图神经网络建模特征-分组-目标变量间关系
- 在缺失数据下仍能准确估算特征重要性,提升选特征效果
- 适合处理社会人口学等分组数据,且对大规模数据高效
我们研究在可自然划分为子组(如按人口统计或年龄划分)的数据集中进行特征选择的问题,每个子组有其主导特征。针对系统性缺失数据——即某子组所有样本的某些特征值均缺失(由数据集成缺陷、监管限制或隐私问题导致),传统互信息计算方法失效。我们的目标是找出固定大小的前K个特征子集,使其与目标变量具有最高联合互信息。由于封闭形式互信息无法直接使用,我们提出通过子组内或跨子组可用特征的互信息关系,推断缺失互信息值。为此,我们构建基于异构图神经网络的通用模型,将问题建模为多层图,通过节点间信息传播捕捉特征-子组-目标变量间的依赖关系。针对训练中的两个可扩展性挑战,提出合理解决方案。实证评估表明,该方法在定性和运行时间上均表现优异。
原文摘要 · Abstract (English)
We investigate the problem of selecting features for datasets that can be naturally partitioned into subgroups (e.g., according to socio-demographic groups and age), each with its own dominant set of features. Within this subgroup-oriented framework, we address the challenge of systematic missing data, a scenario in which some feature values are missing for all tuples of a subgroup, due to flawed data integration, regulatory constraints, or privacy concerns. Feature selection is governed by finding mutual Information, a popular quantification of correlation, between features and a target variable. Our goal is to identify top-K feature subsets of some fixed size with the highest joint mutual information with a target variable. In the presence of systematic missing data, the closed form of mutual information could not simply be applied. We argue that in such a setting, leveraging relationships between available feature mutual information within a subgroup or across subgroups can assist inferring missing mutual information values. We propose a generalizable model based on heterogeneous graph neural network to identify interdependencies between feature-subgroup-target variable connections by modeling it as a multiplex graph, and employing information propagation between its nodes. We address two distinct scalability challenges related to training and propose principled solutions to tackle them. Through an extensive empirical evaluation, we demonstrate the efficacy of the proposed solutions both qualitatively and running time wise.
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