arXiv:2412.08747cs.LGcond-mat.dis-nn2024-12被引 4

用3D分子形状预测人嗅觉感知,能区分立体异构体和混合气味。

DeepNose: An Equivariant Convolutional Neural Network Predictive Of Human Olfactory Percepts

  • 基于等变卷积网络建模嗅觉受体的3D空间滤波机制
  • 对不同嗅觉数据集实现高保真感知预测,准确区分立体异构体
  • 可识别决定气味质量的关键分子特征,适合嗅觉研究与香料设计

嗅觉系统通过一组气味受体(ORs)对分子的响应来感知气味并生成嗅觉知觉。我们假设这些受体可被视为提取与嗅觉相关分子特征的3D空间滤波器,类似于其他感觉模态中的时空滤波器。为此,我们训练了一个卷积神经网络(CNN)来预测来自多个语义数据集的人类嗅觉感知。我们的神经网络DeepNose具有等变架构,其响应对分子方向近似不变。该网络在不同嗅觉数据集上实现了高保真感知预测,并可识别对特定感知描述符有贡献的分子特征。由于DeepNose的设计与生物系统对齐,它能为不同立体异构体预测出不同的感知品质。该网络同时处理多个分子的架构使其能够推断气味混合物的感知质量。我们提出,DeepNose可通过3D分子形状生成高质量的嗅觉感知预测,并帮助识别决定气味质量的分子特征。

原文摘要 · Abstract (English)

The olfactory system employs responses of an ensemble of odorant receptors (ORs) to sense molecules and to generate olfactory percepts. Here we hypothesized that ORs can be viewed as 3D spatial filters that extract molecular features relevant to the olfactory system, similarly to the spatio-temporal filters found in other sensory modalities. To build these filters, we trained a convolutional neural network (CNN) to predict human olfactory percepts obtained from several semantic datasets. Our neural network, the DeepNose, produced responses that are approximately invariant to the molecules' orientation, due to its equivariant architecture. Our network offers high-fidelity perceptual predictions for different olfactory datasets. In addition, our approach allows us to identify molecular features that contribute to specific perceptual descriptors. Because the DeepNose network is designed to be aligned with the biological system, our approach predicts distinct perceptual qualities for different stereoisomers. The architecture of the DeepNose relying on the processing of several molecules at the same time permits inferring the perceptual quality of odor mixtures. We propose that the DeepNose network can use 3D molecular shapes to generate high-quality predictions for human olfactory percepts and help identify molecular features responsible for odor quality.

嗅觉感知等变网络分子特征三维建模

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