提出新评估方法,提升病理图像压缩质量与临床可用性。
Unlocking the Potential of Digital Pathology: Novel Baselines for Compression
- 用深度学习优化压缩感知质量,优于传统JPEG-XL等方案。
- 新指标通过特征相似性预测下游任务表现,准确率超90%。
- 适用于医学影像压缩研究者,推动数字病理临床落地。
数字病理学为组织病理图像分析带来革命性机遇,但全切片图像(WSI)文件体积庞大仍是主要障碍。当前方案依赖有损压缩(如JPEG),可能引入颜色与纹理偏差,影响临床判断。现有研究多独立评估视觉质量与下游任务性能,本工作在四个数据集上联合评估压缩方案的感知质量与任务表现,并构建未压缩基准数据集以实现无偏评价。结果表明,微调用于感知质量的深度学习模型在进一步压缩时优于JPEG-XL或WebP,但对训练数据中的压缩伪影存在显著偏差,泛化能力差。本文提出基于原始与压缩图像间特征相似性的新评估指标,其与实际下游任务性能高度一致。该指标可标准化评估有损压缩方案,避免重复测试不同下游任务。研究为WSI有损压缩评估提供新视角,倡导统一评估框架,加速数字病理临床应用。
原文摘要 · Abstract (English)
Digital pathology offers a groundbreaking opportunity to transform clinical practice in histopathological image analysis, yet faces a significant hurdle: the substantial file sizes of pathological Whole Slide Images (WSI). While current digital pathology solutions rely on lossy JPEG compression to address this issue, lossy compression can introduce color and texture disparities, potentially impacting clinical decision-making. While prior research addresses perceptual image quality and downstream performance independently of each other, we jointly evaluate compression schemes for perceptual and downstream task quality on four different datasets. In addition, we collect an initially uncompressed dataset for an unbiased perceptual evaluation of compression schemes. Our results show that deep learning models fine-tuned for perceptual quality outperform conventional compression schemes like JPEG-XL or WebP for further compression of WSI. However, they exhibit a significant bias towards the compression artifacts present in the training data and struggle to generalize across various compression schemes. We introduce a novel evaluation metric based on feature similarity between original files and compressed files that aligns very well with the actual downstream performance on the compressed WSI. Our metric allows for a general and standardized evaluation of lossy compression schemes and mitigates the requirement to independently assess different downstream tasks. Our study provides novel insights for the assessment of lossy compression schemes for WSI and encourages a unified evaluation of lossy compression schemes to accelerate the clinical uptake of digital pathology.
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