arXiv:2412.13908cs.CV2024-12被引 1

通过记忆机制提升3D医学图像分割模型性能,仅增加4毫秒推理时间

Memorizing SAM: 3D Medical Segment Anything Model with Memorizing Transformer

  • 引入记忆Transformer模块,复用已有高质量内部表示作为记忆源
  • 在TotalSegmentator数据集上平均Dice得分提升11.36%,仅增加4.38毫秒推理耗时
  • 适合资源受限但需高精度分割的3D医学影像场景,代码开源

分割一切模型(SAMs)因其零样本泛化能力,在医学图像分析中备受关注,能在给定用户提示的情况下分割未见类别和域的对象。为充分发挥预训练权重的优势,尤其是在体积医学图像分割领域(准确率关键但标注完整的3D数据有限),本文研究是否可通过轻量级记忆机制提升性能。为此,提出Memorizing SAM,一种集成记忆Transformer的新型3D SAM架构。不同于传统方法在训练或推理时存储内部表示,本模型利用现有高精度内部表示作为记忆源,保障记忆质量。在TotalSegmentator数据集33个类别上的评估显示,Memorizing SAM相比当前最优的FastSAM3D,平均Dice提升11.36%,推理时间仅增加4.38毫秒。代码已公开于https://github.com/swedfr/memorizingSAM。

原文摘要 · Abstract (English)

Segment Anything Models (SAMs) have gained increasing attention in medical image analysis due to their zero-shot generalization capability in segmenting objects of unseen classes and domains when provided with appropriate user prompts. Addressing this performance gap is important to fully leverage the pre-trained weights of SAMs, particularly in the domain of volumetric medical image segmentation, where accuracy is important but well-annotated 3D medical data for fine-tuning is limited. In this work, we investigate whether introducing the memory mechanism as a plug-in, specifically the ability to memorize and recall internal representations of past inputs, can improve the performance of SAM with limited computation cost. To this end, we propose Memorizing SAM, a novel 3D SAM architecture incorporating a memory Transformer as a plug-in. Unlike conventional memorizing Transformers that save the internal representation during training or inference, our Memorizing SAM utilizes existing highly accurate internal representation as the memory source to ensure the quality of memory. We evaluate the performance of Memorizing SAM in 33 categories from the TotalSegmentator dataset, which indicates that Memorizing SAM can outperform state-of-the-art 3D SAM variant i.e., FastSAM3D with an average Dice increase of 11.36% at the cost of only 4.38 millisecond increase in inference time. The source code is publicly available at https://github.com/swedfr/memorizingSAM

3D分割医学图像记忆机制SAM

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