用生成模型合成心脏听诊信号,助力心脏病早期筛查
Synthetic Time Series Data Generation for Healthcare Applications: A PCG Case Study
- 对比WaveNet、DoppelGANger和DiffWave三种生成模型合成心音信号
- 生成数据与真实数据的平均绝对误差低,最大均值差异小,相似度高
- 适合医疗数据稀缺场景,可为心脏病诊断提供增强数据
高质量医疗时间序列数据的生成对推动医疗诊断进步和保护患者隐私至关重要。特别是合成真实的心音图(PCG)信号,可作为低成本高效的先天性心脏病初筛工具。尽管潜力巨大,针对该应用场景的PCG信号合成研究仍相对不足。本研究采用并比较了三种不同类别的前沿生成模型——WaveNet、DoppelGANger和DiffWave,用于生成高质量的PCG数据。实验基于George B. Moody PhysioNet Challenge 2022数据集,通过均方绝对误差(MAE)和最大均值差异(MMD)等常用时间序列生成评估指标进行验证。结果表明,生成的PCG数据与原始数据高度相似,证明所用生成模型在合成真实感PCG信号方面的有效性。未来工作将把该方法集成到数据增强流程中,以合成带杂音的心脏病理性PCG信号,缓解异常数据稀缺问题,从而提升心血管诊断工具的鲁棒性与准确性。
原文摘要 · Abstract (English)
The generation of high-quality medical time series data is essential for advancing healthcare diagnostics and safeguarding patient privacy. Specifically, synthesizing realistic phonocardiogram (PCG) signals offers significant potential as a cost-effective and efficient tool for cardiac disease pre-screening. Despite its potential, the synthesis of PCG signals for this specific application received limited attention in research. In this study, we employ and compare three state-of-the-art generative models from different categories - WaveNet, DoppelGANger, and DiffWave - to generate high-quality PCG data. We use data from the George B. Moody PhysioNet Challenge 2022. Our methods are evaluated using various metrics widely used in the previous literature in the domain of time series data generation, such as mean absolute error and maximum mean discrepancy. Our results demonstrate that the generated PCG data closely resembles the original datasets, indicating the effectiveness of our generative models in producing realistic synthetic PCG data. In our future work, we plan to incorporate this method into a data augmentation pipeline to synthesize abnormal PCG signals with heart murmurs, in order to address the current scarcity of abnormal data. We hope to improve the robustness and accuracy of diagnostic tools in cardiology, enhancing their effectiveness in detecting heart murmurs.
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