arXiv:2501.09298cs.LGq-bio.QM2025-01被引 15

用物理约束神经网络提升传染病预测准确率

Physics-informed deep learning for infectious disease forecasting

  • 将流行病学模型嵌入损失函数,融合理论与数据
  • 在加州疫情数据上预测精度优于RNN/LSTM等模型
  • 结构简单易实现,适合政策制定者快速部署

准确的传染病预测对公共卫生决策和疫情应对至关重要。本文提出一种基于物理信息神经网络(PINNs)的新型传染病预测模型,该方法将分室模型嵌入损失函数,结合流行病学理论与实际数据,有效防止模型过拟合。通过引入子网络考虑移动性、累计接种剂量等影响传播率的协变量,进一步提升预测能力。基于加州州级新冠疫情数据的实验表明,该模型能精准预测病例数、死亡人数和住院人数,性能优于基础基准模型及多种序列深度学习模型(如RNN、LSTM、GRU、Transformer)。其表现与复杂的高斯感染状态预测模型相当,但结构更简单、实现更便捷。结果表明,PINN模型具备作为高效计算工具提升传染病预测能力的潜力。

原文摘要 · Abstract (English)

Accurate forecasting of contagious diseases is critical for public health policymaking and pandemic preparedness. We propose a new infectious disease forecasting model based on physics-informed neural networks (PINNs), an emerging scientific machine learning approach. By embedding a compartmental model into the loss function, our method integrates epidemiological theory with data, helping to prevent model overfitting. We further enhance the model with a sub-network that accounts for covariates such as mobility and cumulative vaccine doses, which influence the transmission rate. Using state-level COVID-19 data from California, we demonstrate that the PINN model accurately predicts cases, deaths, and hospitalizations, aligning well with existing benchmarks. Notably, the PINN model outperforms naive baseline forecasts and several sequence deep learning models, including Recurrent Neural Networks (RNNs), Long Short-Term Memory (LSTM) networks, Gated Recurrent Units (GRUs), and Transformers. It also achieves performance comparable to a sophisticated Gaussian infection state forecasting model that combines compartmental dynamics, a data observation model, and parameter regression. However, the PINN model features a simpler structure and is easier to implement. In summary, we systematically evaluate the PINN model's ability to forecast infectious disease dynamics, demonstrating its potential as an efficient computational tool to strengthen forecasting capabilities.

传染病预测PINN深度学习公共卫生

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