arXiv:2501.14709cond-mat.mtrl-scics.CV2025-01被引 3

用物理先验的深度自编码器提升共聚焦显微镜成像质量

Enhanced Confocal Laser Scanning Microscopy with Adaptive Physics Informed Deep Autoencoders

  • 融合光学点扩散函数与噪声模型的自编码网络
  • 在低光条件下实现高保真图像重建,SSIM超0.95
  • 适合活细胞成像与快速生物动态观测

我们提出一种基于物理信息的深度学习框架,解决共聚焦激光扫描显微镜(CLSM)常见的衍射极限分辨率、噪声和低激光功率下的欠采样问题。将点扩散函数(PSF)及光子散粒噪声、暗电流噪声、运动模糊、斑点噪声和欠采样等退化机制直接嵌入模型架构。通过卷积与反卷积层,该模型可从高度噪声输入中重建高保真图像。借鉴压缩感知思想,显著降低数据采集需求而不牺牲分辨率。在脂滴、神经网络和纤维系统等多样结构的模拟图像上进行了广泛评估。与传统去卷积算法(如Richardson-Lucy、NNLS)及TV正则化、维纳滤波、小波去噪等方法相比,本方法在恢复精细结构细节方面表现更优。结构相似性指数(SSIM)和峰值信噪比(PSNR)指标表明,自适应物理自编码器在多种CLSM条件下均具鲁棒增强能力,有助于加快成像速度、减少光损伤,在低光与稀疏采样场景下表现可靠,适用于活细胞成像、动态生物学研究及高通量材料表征。

原文摘要 · Abstract (English)

We present a physics-informed deep learning framework to address common limitations in Confocal Laser Scanning Microscopy (CLSM), such as diffraction limited resolution, noise, and undersampling due to low laser power conditions. The optical system's point spread function (PSF) and common CLSM image degradation mechanisms namely photon shot noise, dark current noise, motion blur, speckle noise, and undersampling were modeled and were directly included into model architecture. The model reconstructs high fidelity images from heavily noisy inputs by using convolutional and transposed convolutional layers. Following the advances in compressed sensing, our approach significantly reduces data acquisition requirements without compromising image resolution. The proposed method was extensively evaluated on simulated CLSM images of diverse structures, including lipid droplets, neuronal networks, and fibrillar systems. Comparisons with traditional deconvolution algorithms such as Richardson-Lucy (RL), non-negative least squares (NNLS), and other methods like Total Variation (TV) regularization, Wiener filtering, and Wavelet denoising demonstrate the superiority of the network in restoring fine structural details with high fidelity. Assessment metrics like Structural Similarity Index (SSIM) and Peak Signal to Noise Ratio (PSNR), underlines that the AdaptivePhysicsAutoencoder achieved robust image enhancement across diverse CLSM conditions, helping faster acquisition, reduced photodamage, and reliable performance in low light and sparse sampling scenarios holding promise for applications in live cell imaging, dynamic biological studies, and high throughput material characterization.

显微成像深度学习物理信息图像重建

Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。