用深度自适应采样提升罕见事件中传递函数的估计精度
Estimating Committor Functions via Deep Adaptive Sampling on Rare Transition Paths
- 用生成模型在过渡态区域高效生成关键样本
- 新方法使传递函数估计误差降低,训练更稳定
- 适合分子模拟中罕见事件分析的研究者使用
传递函数是研究分子模拟中罕见但重要事件的核心工具,但其计算受高维困境困扰。近年来,利用神经网络估计传递函数因其处理高维问题的潜力受到关注,但需从稀有事件模拟中采样过渡数据,效率极低。过渡数据稀缺导致难以准确逼近传递函数。为此,本文提出一种高效框架——深度自适应采样过渡路径(DASTR),通过深度生成模型在过渡态区域生成有效样本。具体地,将损失函数被积函数中的非负函数视为未归一化概率密度,并用深度生成模型近似该分布。生成的新样本集中于过渡态区域,其他区域样本较少,从而提供高质量训练数据,显著提升传递函数估计精度。通过仿真和真实案例验证了方法的有效性。
原文摘要 · Abstract (English)
The committor functions are central to investigating rare but important events in molecular simulations. It is known that computing the committor function suffers from the curse of dimensionality. Recently, using neural networks to estimate the committor function has gained attention due to its potential for high-dimensional problems. Training neural networks to approximate the committor function needs to sample transition data from straightforward simulations of rare events, which is very inefficient. The scarcity of transition data makes it challenging to approximate the committor function. To address this problem, we propose an efficient framework to generate data points in the transition state region that helps train neural networks to approximate the committor function. We design a Deep Adaptive Sampling method for TRansition paths (DASTR), where deep generative models are employed to generate samples to capture the information of transitions effectively. In particular, we treat a non-negative function in the integrand of the loss functional as an unnormalized probability density function and approximate it with the deep generative model. The new samples from the deep generative model are located in the transition state region and fewer samples are located in the other region. This distribution provides effective samples for approximating the committor function and significantly improves the accuracy. We demonstrate the effectiveness of the proposed method through both simulations and realistic examples.
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