arXiv:2502.01023cs.CVq-bio.QM2025-02

提出新血管分割方法,提升脑部铁/髓鞘定量成像精度

Vessel segmentation for X-separation

  • 基于R2*和磁化率图生成种子,结合几何引导区域生长
  • 相比传统方法,血管掩膜Dice评分最高,有效排除非血管结构
  • 适用于深度学习重建与群体分析,提升定量评估可靠性

χ-分离是一种先进的定量磁敏感性成像(QSM)方法,可生成顺磁性(χpara)和抗磁性(|χdia|)磁化率图,反映脑内铁和髓鞘分布。然而,血管常引入伪影,影响铁和髓鞘的准确量化。为此,本文提出一种新的χ-分离血管分割方法,包含三步:1)从R2*及χpara与|χdia|乘积图生成种子;2)基于血管几何结构进行区域生长,生成血管掩膜;3)通过排除非血管结构对掩膜进行优化。在定性和定量对比中,该方法表现优于传统方法,显著提升骰子系数(Dice score)。在两项应用中验证其有效性:1)用于基于神经网络的χ-sepnet-R2*重建方法的定量评估;2)群体平均感兴趣区(ROI)分析。结果显示,使用该血管掩膜后,重建评估结果显著改善,且群体分析中出现统计学差异。表明在分析χ-分离图时排除血管可获得更准确的评估结果。该方法具有广泛适用性,可为各类研究提供高质量血管掩膜支持。

原文摘要 · Abstract (English)

$χ$-separation is an advanced quantitative susceptibility mapping (QSM) method that is designed to generate paramagnetic ($χ_{para}$) and diamagnetic ($|χ_{dia}|$) susceptibility maps, reflecting the distribution of iron and myelin in the brain. However, vessels have shown artifacts, interfering with the accurate quantification of iron and myelin in applications. To address this challenge, a new vessel segmentation method for $χ$-separation is developed. The method comprises three steps: 1) Seed generation from $\textit{R}_2^*$ and the product of $χ_{para}$ and $|χ_{dia}|$ maps; 2) Region growing, guided by vessel geometry, creating a vessel mask; 3) Refinement of the vessel mask by excluding non-vessel structures. The performance of the method was compared to conventional vessel segmentation methods both qualitatively and quantitatively. To demonstrate the utility of the method, it was tested in two applications: quantitative evaluation of a neural network-based $χ$-separation reconstruction method ($χ$-sepnet-$\textit{R}_2^*$) and population-averaged region of interest (ROI) analysis. The proposed method demonstrates superior performance to the conventional vessel segmentation methods, effectively excluding the non-vessel structures, achieving the highest Dice score coefficient. For the applications, applying vessel masks report notable improvements for the quantitative evaluation of $χ$-sepnet-$\textit{R}_2^*$ and statistically significant differences in population-averaged ROI analysis. These applications suggest excluding vessels when analyzing the $χ$-separation maps provide more accurate evaluations. The proposed method has the potential to facilitate various applications, offering reliable analysis through the generation of a high-quality vessel mask.

磁共振成像血管分割定量磁敏感性脑铁分析

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