提升脑网络模型在不同数据分布下的泛化能力与可解释性
BrainOOD: Out-of-distribution Generalizable Brain Network Analysis
- 设计特征选择与结构提取模块,增强脑网络GNN的OOD泛化能力
- 在多个数据集上比16种方法提升最多8.5%的泛化性能
- 首次构建脑网络OOD基准,适合神经科学与AI交叉研究者
在神经科学中,识别与阿尔茨海默病、自闭症等神经疾病相关的独特模式对早期诊断和有效干预至关重要。图神经网络(GNN)在分析脑网络方面表现出潜力,但存在两大挑战:(1)多中心脑网络数据中的分布偏移导致模型在分布外(OOD)样本上泛化能力差;(2)难以解释关键脑区在疾病中的作用。现有图模型在其他领域有效,但在脑网络特性下表现不佳。为此,我们提出BrainOOD框架,专为脑网络设计,提升GNN的OOD泛化与可解释性。该框架包含特征选择器与结构提取器,引入改进的图信息瓶颈(GIB)等辅助损失,恢复因果子图。通过跨脑网络结构对齐与噪声特征过滤,实现关键脑区的可靠解释。实验表明,本方法优于16种现有方法,对OOD受试者泛化能力最高提升8.5%。案例研究验证了提取模式的科学合理性,与已知神经科学文献一致。我们还提出了首个脑网络OOD基准,为该领域未来研究奠定基础。代码已开源。
原文摘要 · Abstract (English)
In neuroscience, identifying distinct patterns linked to neurological disorders, such as Alzheimer's and Autism, is critical for early diagnosis and effective intervention. Graph Neural Networks (GNNs) have shown promising in analyzing brain networks, but there are two major challenges in using GNNs: (1) distribution shifts in multi-site brain network data, leading to poor Out-of-Distribution (OOD) generalization, and (2) limited interpretability in identifying key brain regions critical to neurological disorders. Existing graph OOD methods, while effective in other domains, struggle with the unique characteristics of brain networks. To bridge these gaps, we introduce BrainOOD, a novel framework tailored for brain networks that enhances GNNs' OOD generalization and interpretability. BrainOOD framework consists of a feature selector and a structure extractor, which incorporates various auxiliary losses including an improved Graph Information Bottleneck (GIB) objective to recover causal subgraphs. By aligning structure selection across brain networks and filtering noisy features, BrainOOD offers reliable interpretations of critical brain regions. Our approach outperforms 16 existing methods and improves generalization to OOD subjects by up to 8.5%. Case studies highlight the scientific validity of the patterns extracted, which aligns with the findings in known neuroscience literature. We also propose the first OOD brain network benchmark, which provides a foundation for future research in this field. Our code is available at https://github.com/AngusMonroe/BrainOOD.
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