arXiv:2502.05230q-bio.QMcs.AI2025-02被引 1

用扩散模型不确定性指导采样,大幅缩短蛋白质NMR谱采集时间。

DiffNMR2: NMR Guided Sampling Acquisition Through Diffusion Model Uncertainty

  • 基于扩散模型生成谱图,利用预测不确定性引导高效采样。
  • 重建准确率提升52.9%,伪峰减少55.6%,采样时间节省60%。
  • 适合需要快速高分辨谱图的药物研发与材料科学场景。

核磁共振(NMR)通过射频脉冲探测分子原子核的共振信号以解析结构,但高分辨率谱图的采集时间仍是瓶颈,尤其对复杂生物样品如蛋白质而言。本文提出一种新型高效子采样策略,基于在蛋白NMR数据上训练的扩散模型,通过迭代重建欠采样谱图,并利用模型不确定性引导后续采样,显著缩短采集时间。相比现有最优方法,本方法在复杂NMR实验中重建准确率提升52.9%,伪峰减少55.6%,采样时间减少60%。该技术在药物发现、材料科学等领域具有重要应用前景,可实现快速且高分辨率的谱图分析。

原文摘要 · Abstract (English)

Nuclear Magnetic Resonance (NMR) spectrometry uses electro-frequency pulses to probe the resonance of a compound's nucleus, which is then analyzed to determine its structure. The acquisition time of high-resolution NMR spectra remains a significant bottleneck, especially for complex biological samples such as proteins. In this study, we propose a novel and efficient sub-sampling strategy based on a diffusion model trained on protein NMR data. Our method iteratively reconstructs under-sampled spectra while using model uncertainty to guide subsequent sampling, significantly reducing acquisition time. Compared to state-of-the-art strategies, our approach improves reconstruction accuracy by 52.9\%, reduces hallucinated peaks by 55.6%, and requires 60% less time in complex NMR experiments. This advancement holds promise for many applications, from drug discovery to materials science, where rapid and high-resolution spectral analysis is critical.

NMR扩散模型采样优化

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