arXiv:2502.09663cs.CVcs.AI2025-02

用扩散模型解释分类器,找出细胞细微差异

DiffEx: Explaining a Classifier with Diffusion Models to Identify Microscopic Cellular Variations

  • 用扩散模型生成可解释的图像特征来分析分类决策
  • 在自然与生物图像上验证了对微小细胞变化的识别能力
  • 适合生物医学研究者用于发现疾病标志物

近年来,深度学习模型已广泛应用于多种模态的生物数据。判别性深度学习模型在图像分类(如健康与患病、处理与未处理)方面表现优异。然而,这些模型因复杂且缺乏可解释性,常被视为黑箱,限制了其在真实生物场景中的应用。在生物研究中,可解释性至关重要:理解分类器决策并识别不同条件间的细微差异,是揭示治疗效果、疾病进展和生物过程的关键。为此,我们提出DiffEx,一种通过生成视觉可解释属性来解释分类器并识别不同条件下微观细胞变异的方法。我们在自然图像和生物图像训练的分类器上验证了DiffEx的有效性。此外,利用DiffEx揭示了显微镜数据集内的表型差异。通过分类器解释提供细胞变异洞察,DiffEx有望推动疾病理解,并助力药物发现中新型生物标志物的识别。

原文摘要 · Abstract (English)

In recent years, deep learning models have been extensively applied to biological data across various modalities. Discriminative deep learning models have excelled at classifying images into categories (e.g., healthy versus diseased, treated versus untreated). However, these models are often perceived as black boxes due to their complexity and lack of interpretability, limiting their application in real-world biological contexts. In biological research, explainability is essential: understanding classifier decisions and identifying subtle differences between conditions are critical for elucidating the effects of treatments, disease progression, and biological processes. To address this challenge, we propose DiffEx, a method for generating visually interpretable attributes to explain classifiers and identify microscopic cellular variations between different conditions. We demonstrate the effectiveness of DiffEx in explaining classifiers trained on natural and biological images. Furthermore, we use DiffEx to uncover phenotypic differences within microscopy datasets. By offering insights into cellular variations through classifier explanations, DiffEx has the potential to advance the understanding of diseases and aid drug discovery by identifying novel biomarkers.

可解释性扩散模型细胞分析

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