探索量子算法提升生物医学张量分解效率
Towards Quantum Tensor Decomposition in Biomedical Applications
- 用主题建模系统梳理张量分解在多组学等领域的应用
- 发现高维数据下张量秩选择与计算扩展性是主要瓶颈
- 评估量子算法在近中期设备上实现张量分解的可行性
张量分解已成为多模态生物医学数据特征提取的强大工具。本文综述了Tucker、CANDECOMP/PARAFAC、尖峰张量分解等方法在医学影像、多组学及空间转录组学等领域的广泛应用。为系统分析文献,采用基于主题建模的方法识别并归类张量分解在生物医学中的不同研究子领域,揭示关键趋势与未来方向。我们评估了潜在空间可扩展性及最优张量秩获取所面临的挑战,这些因素常阻碍从日益庞大复杂的数据集中提取有意义的特征。此外,探讨了张量分解的近期量子算法进展,分析量子计算如何应对上述挑战。研究包含对量子计算平台的初步资源估算,并检验量子增强型张量分解在近中期量子设备上的实现可行性。本综述不仅总结了当前张量分解在生物医学分析中的应用与挑战,还提出了有前景的量子计算策略,以增强从复杂生物医学数据中挖掘可行动洞察的能力。
原文摘要 · Abstract (English)
Tensor decomposition has emerged as a powerful framework for feature extraction in multi-modal biomedical data. In this review, we present a comprehensive analysis of tensor decomposition methods such as Tucker, CANDECOMP/PARAFAC, spiked tensor decomposition, etc. and their diverse applications across biomedical domains such as imaging, multi-omics, and spatial transcriptomics. To systematically investigate the literature, we applied a topic modeling-based approach that identifies and groups distinct thematic sub-areas in biomedicine where tensor decomposition has been used, thereby revealing key trends and research directions. We evaluated challenges related to the scalability of latent spaces along with obtaining the optimal rank of the tensor, which often hinder the extraction of meaningful features from increasingly large and complex datasets. Additionally, we discuss recent advances in quantum algorithms for tensor decomposition, exploring how quantum computing can be leveraged to address these challenges. Our study includes a preliminary resource estimation analysis for quantum computing platforms and examines the feasibility of implementing quantum-enhanced tensor decomposition methods on near-term quantum devices. Collectively, this review not only synthesizes current applications and challenges of tensor decomposition in biomedical analyses but also outlines promising quantum computing strategies to enhance its impact on deriving actionable insights from complex biomedical data.
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