用深度学习实现田间与实验室大豆荚果和种子的精准计数
Soybean pod and seed counting in both outdoor fields and indoor laboratories using unions of deep neural networks
- 融合YOLO与SAM、领域自适应技术提升田间计数鲁棒性
- 田间计数误差为6.13(荚)和10.05(籽),实验室接近完美(<2)
- 适合农业育种、智能农场及自动化产量评估场景
在收获前自动计数田间大豆荚果和种子可快速估算产量,室内实验室计数则更精确,两者均能显著加速育种进程。然而,田间准确计数仍具挑战,实验室也缺乏足够精准工具。本研究开发了适用于田间和实验室的高效深度学习模型。针对田间场景,通过标注可见与被遮挡种子,使YOLO具备估计遮挡种子数量的能力;进一步结合HQ-SAM(YOLO-SAM)与领域自适应技术(YOLO-DA),增强模型在不同田间图像中的泛化能力。在田间图像测试中,荚果计数平均绝对误差(MAE)为6.13,种子计数为10.05。针对室内场景,采用引入Swin Transformer模块的Mask-RCNN(Mask-RCNN-Swin),仅用少量标注数据生成的合成图像训练,最终在两个独立实验的真实实验室图像上,荚果与种子计数的MAE分别达1.07和1.33,接近完美。
原文摘要 · Abstract (English)
Automatic counting soybean pods and seeds in outdoor fields allows for rapid yield estimation before harvesting, while indoor laboratory counting offers greater accuracy. Both methods can significantly accelerate the breeding process. However, it remains challenging for accurately counting pods and seeds in outdoor fields, and there are still no accurate enough tools for counting pods and seeds in laboratories. In this study, we developed efficient deep learning models for counting soybean pods and seeds in both outdoor fields and indoor laboratories. For outdoor fields, annotating not only visible seeds but also occluded seeds makes YOLO have the ability to estimate the number of soybean seeds that are occluded. Moreover, we enhanced YOLO architecture by integrating it with HQ-SAM (YOLO-SAM), and domain adaptation techniques (YOLO-DA), to improve model robustness and generalization across soybean images taken in outdoor fields. Testing on soybean images from the outdoor field, we achieved a mean absolute error (MAE) of 6.13 for pod counting and 10.05 for seed counting. For the indoor setting, we utilized Mask-RCNN supplemented with a Swin Transformer module (Mask-RCNN-Swin), models were trained exclusively on synthetic training images generated from a small set of labeled data. This approach resulted in near-perfect accuracy, with an MAE of 1.07 for pod counting and 1.33 for seed counting across actual laboratory images from two distinct studies.
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