保护化学数据隐私,实现多方协作训练逆合成模型。
Chemical knowledge-informed framework for privacy-aware retrosynthesis learning
- 通过化学知识指导参数聚合,避免原始数据共享。
- 在多个数据集上性能显著优于现有基线方法。
- 适合制药、材料等需保护敏感反应数据的机构使用。
化学反应数据是制药、材料科学和工业化学等领域的重要资产,具有高度机密性,常包含企业核心竞争力。然而,当前基于机器学习的逆合成模型训练通常将多方数据集中至单一节点,存在严重的隐私泄露风险,包括跨组织数据传输与存储过程中的信息暴露。本文提出化学知识引导的隐私保护框架(CKIF),实现多机构分布式训练,无需共享原始反应数据。该框架通过迭代式参数聚合,利用预测产物的化学性质量化各模型表现,自适应调整聚合权重。在多个反应数据集上的实验表明,CKIF显著优于多种强基线方法。
原文摘要 · Abstract (English)
Chemical reaction data is a pivotal asset, driving advances in competitive fields such as pharmaceuticals, materials science, and industrial chemistry. Its proprietary nature renders it sensitive, as it often includes confidential insights and competitive advantages organizations strive to protect. However, in contrast to this need for confidentiality, the current standard training paradigm for machine learning-based retrosynthesis gathers reaction data from multiple sources into one single edge to train prediction models. This paradigm poses considerable privacy risks as it necessitates broad data availability across organizational boundaries and frequent data transmission between entities, potentially exposing proprietary information to unauthorized access or interception during storage and transfer. In the present study, we introduce the chemical knowledge-informed framework (CKIF), a privacy-preserving approach for learning retrosynthesis models. CKIF enables distributed training across multiple chemical organizations without compromising the confidentiality of proprietary reaction data. Instead of gathering raw reaction data, CKIF learns retrosynthesis models through iterative, chemical knowledge-informed aggregation of model parameters. In particular, the chemical properties of predicted reactants are leveraged to quantitatively assess the observable behaviors of individual models, which in turn determines the adaptive weights used for model aggregation. On a variety of reaction datasets, CKIF outperforms several strong baselines by a clear margin.
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