用MRI图像分析脑部特定区域,无创识别结核性脑膜炎患者。
Graph Classification and Radiomics Signature for Identification of Tuberculous Meningitis
- 构建像素图模型,利用三维像素空间关系提取特征
- 在脑间质池区域实现85.71%的分类准确率,优于现有方法
- 适合神经影像分析与医学人工智能研究者参考
结核性脑膜炎(TBM)是由结核分枝杆菌引起的严重脑部感染,常需通过有创腰椎穿刺和脑脊液检测确诊。本研究旨在利用非对比增强的T1加权磁共振成像(T1w MRI)扫描对TBM患者进行分类。我们假设脑部特定区域(如脚间池、骨组织和胼胝体)含有可非侵入性区分患者的视觉标志。提出一种新型像素阵列图分类器(PAG-Classifier),基于图结构框架提取相邻3D像素间的空间关系特征,并通过特征值分解获得显著特征,用于机器学习分类。采用放射组学方法,基于相关特征对患者进行分类。使用内部数据集(共52例,其中32例为经脑脊液检出结核菌确诊的TBM患者,20例为健康对照)验证,结果显示,针对脑间质池区域,PAG-Classifier在五折交叉验证下平均F1得分为85.71%,放射组学分类器达到92.85%,分别超越当前最先进水平15%和22%。但骨组织和胼胝体区域分类效果差,平均F1得分低于50%。结论表明,如PAG-Classifier等算法可有效用于TBM的非侵入性分析,尤其针对脚间池;而骨组织和胼胝体区域缺乏可区分特征。
原文摘要 · Abstract (English)
Introduction: Tuberculous meningitis (TBM) is a serious brain infection caused by Mycobacterium tuberculosis, characterized by inflammation of the meninges covering the brain and spinal cord. Diagnosis often requires invasive lumbar puncture (LP) and cerebrospinal fluid (CSF) analysis. Objectives: This study aims to classify TBM patients using T1-weighted (T1w) non-contrast Magnetic Resonance Imaging (MRI) scans. We hypothesize that specific brain regions, such as the interpeduncular cisterns, bone, and corpus callosum, contain visual markers that can non-invasively distinguish TBM patients from healthy controls. We propose a novel Pixel-array Graphs Classifier (PAG-Classifier) that leverages spatial relationships between neighbouring 3D pixels in a graph-based framework to extract significant features through eigen decomposition. These features are then used to train machine learning classifiers for effective patient classification. We validate our approach using a radiomics-based methodology, classifying TBM patients based on relevant radiomics features. Results: We utilized an internal dataset consisting of 52 scans, 32 from confirmed TBM patients based on mycobacteria detection in CSF, and 20 from healthy individuals. We achieved a 5-fold cross-validated average F1 score of 85.71% for cistern regions with our PAG-Classifier and 92.85% with the radiomics features classifier, surpassing current state-of-the-art benchmarks by 15% and 22%, respectively. However, bone and corpus callosum regions showed poor classification effectiveness, with average F1 scores below 50%. Conclusion: Our study suggests that algorithms like the PAG-Classifier serve as effective tools for non-invasive TBM analysis, particularly by targeting the interpeduncular cistern. Findings indicate that the bone and corpus callosum regions lack distinctive patterns for differentiation.
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