arXiv:2504.08875q-bio.QMcs.HC2025-04被引 3

DataMap让高维生物数据可视化更安全便捷,无需安装即可在浏览器中分析。

DataMap: A Portable Application for Visualizing High-Dimensional Data

  • 基于浏览器运行,保障数据隐私且免安装部署
  • 支持热图、PCA、t-SNE三种可视化方式,可交互探索数据结构
  • 自动生成可复现的R代码,适合科研人员快速分析高维数据

高维数据的可视化与分析在生物医学研究中至关重要。亟需安全、可扩展且可复现的工具以支持数据探索与解读。我们推出了DataMap,一款基于浏览器的高维数据可视化应用,支持热图、主成分分析(PCA)和t分布随机邻域嵌入(t-SNE)。DataMap在浏览器中运行,确保数据隐私,无需安装或服务器支持。应用提供直观的用户界面,用于数据变换、注释及生成可复现的R代码。项目开源,可通过https://gexijin.github.io/datamap/免费访问,源码位于https://github.com/gexijin/datamap,也可作为R包安装使用。

原文摘要 · Abstract (English)

Motivation: The visualization and analysis of high-dimensional data are essential in biomedical research. There is a need for secure, scalable, and reproducible tools to facilitate data exploration and interpretation. Results: We introduce DataMap, a browser-based application for visualization of high-dimensional data using heatmaps, principal component analysis (PCA), and t-distributed stochastic neighbor embedding (t-SNE). DataMap runs in the web browser, ensuring data privacy while eliminating the need for installation or a server. The application has an intuitive user interface for data transformation, annotation, and generation of reproducible R code. Availability and Implementation: Freely available as a GitHub page https://gexijin.github.io/datamap/. The source code can be found at https://github.com/gexijin/datamap, and can also be installed as an R package. Contact: [email protected]

数据可视化生物信息R语言高维数据

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