arXiv:2504.15587cs.LGcs.AI2025-04被引 2

用元学习生成分子图谱,少数据下快速设计目标分子

MetaMolGen: A Neural Graph Motif Generation Model for De Novo Molecular Design

  • 基于元学习构建分子图谱生成模型,映射到标准化潜在空间
  • 低数据条件下生成有效且多样的SMILES序列,性能超越基线
  • 适合小样本药物与材料分子设计,支持属性条件生成

分子生成在药物发现和材料科学中至关重要,尤其在数据稀缺场景下,传统生成模型常难以实现理想的条件泛化。为此,我们提出MetaMolGen,一种基于一阶元学习的分子生成器,专为少样本和属性条件下的分子生成设计。MetaMolGen通过将分子图谱映射到标准化潜在空间来统一其分布,并采用轻量级自回归序列模型生成忠实反映分子结构的SMILES序列。同时,通过集成可学习的属性投影器,支持目标属性条件下的分子生成。实验表明,MetaMolGen在低数据条件下持续生成有效且多样化的SMILES序列,优于常规基线,展现出快速适应和高效条件生成的优势,适用于实际分子设计。

原文摘要 · Abstract (English)

Molecular generation plays an important role in drug discovery and materials science, especially in data-scarce scenarios where traditional generative models often struggle to achieve satisfactory conditional generalization. To address this challenge, we propose MetaMolGen, a first-order meta-learning-based molecular generator designed for few-shot and property-conditioned molecular generation. MetaMolGen standardizes the distribution of graph motifs by mapping them to a normalized latent space, and employs a lightweight autoregressive sequence model to generate SMILES sequences that faithfully reflect the underlying molecular structure. In addition, it supports conditional generation of molecules with target properties through a learnable property projector integrated into the generative process.Experimental results demonstrate that MetaMolGen consistently generates valid and diverse SMILES sequences under low-data regimes, outperforming conventional baselines. This highlights its advantage in fast adaptation and efficient conditional generation for practical molecular design.

分子生成元学习少样本

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