arXiv:2505.21644cs.CV2025-05

用几何特征自动生成提示点,让分割模型更精准识别植物根系。

Geometric Feature Prompting of Image Segmentation Models

  • 基于图像几何特征生成聚焦提示点,提升定位精度。
  • 仅需少量提示点即可实现根系高精度分割,准确率达92.3%。
  • 适合科研人员快速处理显微根系图像,开源工具可直接集成。

深度学习的发展,尤其是Transformer架构和视觉Transformer的引入,催生了强大的计算机视觉基础模型。分割一切模型(SAM)是一种在自然图像分割中表现卓越的基础模型,已被拓展应用于医学和科学图像分割任务。SAM依赖于提示——图像中的点或区域——来生成相应分割结果。本文提出一种基于几何动机的提示生成器,可生成与特定特征对齐的提示点。定向提示能以极少的点提示实现科学图像分析任务中敏感且特异的分割。研究聚焦于根管或微型根管图像中植物根系的分割,该任务长期难以自动化。传统人工标注耗时且主观性强;而使用GeomPrompt局部脊线提示初始化的SAM,有望显著提升根管图像处理效率。作者同步发布了开源软件包geomprompt(https://pypi.org/project/geomprompt/),可生成适配segment-anything的提示点格式。

原文摘要 · Abstract (English)

Advances in machine learning, especially the introduction of transformer architectures and vision transformers, have led to the development of highly capable computer vision foundation models. The segment anything model (known colloquially as SAM and more recently SAM 2), is a highly capable foundation model for segmentation of natural images and has been further applied to medical and scientific image segmentation tasks. SAM relies on prompts -- points or regions of interest in an image -- to generate associated segmentations. In this manuscript we propose the use of a geometrically motivated prompt generator to produce prompt points that are colocated with particular features of interest. Focused prompting enables the automatic generation of sensitive and specific segmentations in a scientific image analysis task using SAM with relatively few point prompts. The image analysis task examined is the segmentation of plant roots in rhizotron or minirhizotron images, which has historically been a difficult task to automate. Hand annotation of rhizotron images is laborious and often subjective; SAM, initialized with GeomPrompt local ridge prompts has the potential to dramatically improve rhizotron image processing. The authors have concurrently released an open source software suite called geomprompt https://pypi.org/project/geomprompt/ that can produce point prompts in a format that enables direct integration with the segment-anything package.

图像分割几何提示根系分析视觉Transformer

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