TissUnet可精准分割脑MRI中的颅骨与皮下组织,助力儿童到成人的健康研究。
TissUnet: Improved Extracranial Tissue and Cranium Segmentation for Children through Adulthood
- 基于深度学习,从常规T1加权MRI自动分割颅骨、脂肪和肌肉
- 在健康人和肿瘤患者中平均分割精度达Dice 0.83,优于现有方法
- 适用于儿童至成人全年龄段,支持大规模临床研究
脑部磁共振成像(MRI)中可见的颅外组织对健康评估和临床决策具有重要价值,但极少被量化。现有工具缺乏广泛验证,尤其在发育中大脑或病理情况下表现不足。本文提出TissUnet,一种深度学习模型,可从常规三维T1加权MRI(含或不含增强)中分割颅骨、皮下脂肪和肌肉。模型基于155对MRI-CT扫描训练,并在涵盖广泛年龄范围及脑瘤患者的九个数据集上验证。与37对MRI-CT生成的AI-CT标签对比,健康成人队列中中位Dice系数为0.79(四分位距:0.77–0.81)。在专家手动标注的验证中,健康个体中位Dice为0.83(0.83–0.84),肿瘤病例为0.81(0.78–0.83),优于此前最先进方法。接受度测试经仲裁后接受率达89%(N=108),在盲法对比评审中表现优异(N=45),覆盖儿童健康与肿瘤病例。TissUnet实现了快速、准确、可重复的颅外组织分割,支持基于标准脑T1w MRI的大规模颅面形态、治疗效应及心血管代谢风险研究。
原文摘要 · Abstract (English)
Extracranial tissues visible on brain magnetic resonance imaging (MRI) may hold significant value for characterizing health conditions and clinical decision-making, yet they are rarely quantified. Current tools have not been widely validated, particularly in settings of developing brains or underlying pathology. We present TissUnet, a deep learning model that segments skull bone, subcutaneous fat, and muscle from routine three-dimensional T1-weighted MRI, with or without contrast enhancement. The model was trained on 155 paired MRI-computed tomography (CT) scans and validated across nine datasets covering a wide age range and including individuals with brain tumors. In comparison to AI-CT-derived labels from 37 MRI-CT pairs, TissUnet achieved a median Dice coefficient of 0.79 [IQR: 0.77-0.81] in a healthy adult cohort. In a second validation using expert manual annotations, median Dice was 0.83 [IQR: 0.83-0.84] in healthy individuals and 0.81 [IQR: 0.78-0.83] in tumor cases, outperforming previous state-of-the-art method. Acceptability testing resulted in an 89% acceptance rate after adjudication by a tie-breaker(N=108 MRIs), and TissUnet demonstrated excellent performance in the blinded comparative review (N=45 MRIs), including both healthy and tumor cases in pediatric populations. TissUnet enables fast, accurate, and reproducible segmentation of extracranial tissues, supporting large-scale studies on craniofacial morphology, treatment effects, and cardiometabolic risk using standard brain T1w MRI.
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