arXiv:2506.09668cs.CVcs.LG2025-06被引 3

用隐式神经网络构建可条件生成的胎儿脑时空模型,支持罕见病研究。

CINeMA: Conditional Implicit Neural Multi-Modal Atlas for a Spatio-Temporal Representation of the Perinatal Brain

  • 在潜空间建模,避免繁琐配准,构建速度从天级降至分钟级
  • 支持胎龄、出生日龄及脑积水等病理条件的灵活生成
  • 适用于数据稀缺场景,支持分割、年龄预测与数据增强

胎儿和新生儿脑磁共振成像揭示了快速神经发育过程,其解剖结构在数日内发生显著变化。研究这一关键发育阶段需高时空分辨率的脑图谱(atlases)。现有传统图谱与深度学习方法依赖大规模数据集,难以应对病理情况下数据稀缺的问题。本文提出CINeMA(Conditional Implicit Neural Multi-Modal Atlas),一种新型高分辨率、时空多模态脑图谱框架,适用于低数据场景。CINeMA在潜空间中运行,无需耗时的图像配准,将图谱构建时间从数天缩短至分钟级。它可灵活条件化于胎龄(GA)、出生后年龄、脑积水(VM)和胼胝体缺如(ACC)等解剖特征。该框架支持组织分割、年龄预测等下游任务,并具备生成合成数据与解剖引导数据增强的能力。在准确率、效率和通用性上均超越现有方法。代码与图谱已开源:https://github.com/m-dannecker/CINeMA。

原文摘要 · Abstract (English)

Magnetic resonance imaging of fetal and neonatal brains reveals rapid neurodevelopment marked by substantial anatomical changes unfolding within days. Studying this critical stage of the developing human brain, therefore, requires accurate brain models-referred to as atlases-of high spatial and temporal resolution. To meet these demands, established traditional atlases and recently proposed deep learning-based methods rely on large and comprehensive datasets. This poses a major challenge for studying brains in the presence of pathologies for which data remains scarce. We address this limitation with CINeMA (Conditional Implicit Neural Multi-Modal Atlas), a novel framework for creating high-resolution, spatio-temporal, multimodal brain atlases, suitable for low-data settings. Unlike established methods, CINeMA operates in latent space, avoiding compute-intensive image registration and reducing atlas construction times from days to minutes. Furthermore, it enables flexible conditioning on anatomical features including GA, birth age, and pathologies like ventriculomegaly (VM) and agenesis of the corpus callosum (ACC). CINeMA supports downstream tasks such as tissue segmentation and age prediction whereas its generative properties enable synthetic data creation and anatomically informed data augmentation. Surpassing state-of-the-art methods in accuracy, efficiency, and versatility, CINeMA represents a powerful tool for advancing brain research. We release the code and atlases at https://github.com/m-dannecker/CINeMA.

脑图谱隐式神经表示多模态生成发育医学

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