arXiv:2506.12190cs.CVcs.AI2025-06被引 7

构建首个乳腺DCE-MRI多中心数据集并实现精准治疗反应预测

BreastDCEDL: A Comprehensive Breast Cancer DCE-MRI Dataset and Transformer Implementation for Treatment Response Prediction

  • 整合三大临床队列数据,构建标准化3D MRI数据集
  • 基于Vision Transformer模型在HR+/HER2-患者中实现AUC 0.94的预测性能
  • 适合医学影像与AI交叉研究者使用

乳腺癌仍是全球癌症死亡的主要原因,早期检测和治疗反应监测至关重要。我们提出BreastDCEDL,一个面向深度学习的综合性数据集,包含来自I-SPY1、I-SPY2和杜克队列共2,070名乳腺癌患者的术前3D动态对比增强MRI(DCE-MRI)扫描,数据均源自癌症成像档案(The Cancer Imaging Archive)。原始DICOM影像经严格转换为标准化3D NIfTI格式,保留信号完整性,并配有统一的肿瘤标注及临床信息(包括病理完全缓解pCR、激素受体状态HR、HER2状态)。尽管DCE-MRI提供关键诊断信息,且深度学习具备巨大潜力,但受限于缺乏公开可访问的多中心数据集。BreastDCEDL填补了这一空白,支持先进模型开发,包括需大量训练数据的Transformer架构。我们首次构建基于Vision Transformer(ViT)的乳腺DCE-MRI模型,利用三相(注射前、早期后、晚期后)图像融合的RGB输入进行训练,在HR+/HER2-患者中达到AUC 0.94、准确率0.93的最新水平。数据集包含预定义基准划分,支持可复现研究,推动乳腺癌影像的临床建模。

原文摘要 · Abstract (English)

Breast cancer remains a leading cause of cancer-related mortality worldwide, making early detection and accurate treatment response monitoring critical priorities. We present BreastDCEDL, a curated, deep learning-ready dataset comprising pre-treatment 3D Dynamic Contrast-Enhanced MRI (DCE-MRI) scans from 2,070 breast cancer patients drawn from the I-SPY1, I-SPY2, and Duke cohorts, all sourced from The Cancer Imaging Archive. The raw DICOM imaging data were rigorously converted into standardized 3D NIfTI volumes with preserved signal integrity, accompanied by unified tumor annotations and harmonized clinical metadata including pathologic complete response (pCR), hormone receptor (HR), and HER2 status. Although DCE-MRI provides essential diagnostic information and deep learning offers tremendous potential for analyzing such complex data, progress has been limited by lack of accessible, public, multicenter datasets. BreastDCEDL addresses this gap by enabling development of advanced models, including state-of-the-art transformer architectures that require substantial training data. To demonstrate its capacity for robust modeling, we developed the first transformer-based model for breast DCE-MRI, leveraging Vision Transformer (ViT) architecture trained on RGB-fused images from three contrast phases (pre-contrast, early post-contrast, and late post-contrast). Our ViT model achieved state-of-the-art pCR prediction performance in HR+/HER2- patients (AUC 0.94, accuracy 0.93). BreastDCEDL includes predefined benchmark splits, offering a framework for reproducible research and enabling clinically meaningful modeling in breast cancer imaging.

乳腺癌DCE-MRITransformerAI医疗

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