arXiv:2507.00445cs.LGcs.AI2025-07被引 7

用迭代蒸馏让扩散模型更好优化生物分子设计中的奖励函数。

Iterative Distillation for Reward-Guided Fine-Tuning of Diffusion Models in Biomolecular Design

  • 通过离线数据收集与软最优策略模拟,实现稳定训练。
  • 在蛋白质、小分子和调控DNA设计中均显著提升奖励优化效果。
  • 适合需要非可导奖励的生物分子生成任务研究者使用。

针对生物分子设计中基于奖励的扩散模型微调问题,本文提出一种基于迭代蒸馏的微调框架。该方法将问题建模为策略蒸馏:在滚动采集阶段收集离线数据,在滚动执行阶段模拟基于奖励的软最优策略,并通过最小化当前策略与模拟策略间的KL散度来更新模型。相比现有强化学习方法,该离线设定结合KL最小化有效提升了训练稳定性与样本效率。实验表明,该方法在蛋白质、小分子及调控DNA设计等多样任务中均展现出优异的奖励优化能力。源代码已公开于https://divelab.github.io/VIDD/。

原文摘要 · Abstract (English)

We address the problem of fine-tuning diffusion models for reward-guided generation in biomolecular design. While diffusion models have proven highly effective in modeling complex, high-dimensional data distributions, real-world applications often demand more than high-fidelity generation, requiring optimization with respect to potentially non-differentiable reward functions such as physics-based simulation or rewards based on scientific knowledge. Although RL methods have been explored to fine-tune diffusion models for such objectives, they often suffer from instability, low sample efficiency, and mode collapse due to their on-policy nature. In this work, we propose an iterative distillation-based fine-tuning framework that enables diffusion models to optimize for arbitrary reward functions. Our method casts the problem as policy distillation: it collects off-policy data during the roll-in phase, simulates reward-based soft-optimal policies during roll-out, and updates the model by minimizing the KL divergence between the simulated soft-optimal policy and the current model policy. Our off-policy formulation, combined with KL divergence minimization, enhances training stability and sample efficiency compared to existing RL-based methods. Empirical results demonstrate the effectiveness and superior reward optimization of our approach across diverse tasks in protein, small molecule, and regulatory DNA design. The source code is released at (https://divelab.github.io/VIDD/).

扩散模型生物分子设计奖励优化策略蒸馏

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