arXiv:2507.07604cs.LGq-bio.QM2025-07

用人体自然信号通路实现精准神经治疗,提升疾病干预效果

Synthetic MC via Biological Transmitters: Therapeutic Modulation of the Gut-Brain Axis

  • 通过调控肠脑轴自然通信路径替代人工分子信号生成
  • 机器学习模型在有限数据下准确识别关键调节因子
  • 适合个性化医疗与难治性神经疾病研究者使用

合成分子通信(SMC)是未来医疗系统的核心,依赖物联网生物纳米设备持续监测体内生化信号。为实现传感与调控闭环,体内分子通信信号的检测与生成至关重要。然而,通过合成纳米设备在体内生成信号面临技术、法律、安全与伦理挑战。本文提出一种新方案:不直接生成信号,而是通过调节人体天然的肠脑轴(GBA)系统间接实现信号生成。已有疗法如营养补充剂或特定饮食被用于治疗难治性癫痫等神经系统疾病,但其分子作用机制大多未知,导致治疗标准化且效果因人而异。本文利用体内IoBNT设备收集的个人健康数据,设计更灵活、鲁棒的GBA调节疗法。我们定义了治疗性GBA调节的理论要求,并提出一个机器学习模型,在仅有少量实际数据的情况下验证这些要求。在多个数据集上的评估表明,该模型能高精度识别不同GBA调节因子。最终,模型成功识别出对治疗起关键作用的特异性调节通路。

原文摘要 · Abstract (English)

Synthetic molecular communication (SMC) is a key enabler for future healthcare systems in which Internet of Bio-Nano-Things (IoBNT) devices facilitate the continuous monitoring of a patient's biochemical signals. To close the loop between sensing and actuation, both the detection and the generation of in-body molecular communication (MC) signals is key. However, generating signals inside the human body, e.g., via synthetic nanodevices, poses a challenge in SMC, due to technological obstacles as well as legal, safety, and ethical issues. Hence, this paper considers an SMC system in which signals are generated indirectly via the modulation of a natural in-body MC system, namely the gut-brain axis (GBA). Therapeutic GBA modulation is already established as treatment for neurological diseases, e.g., drug refractory epilepsy (DRE), and performed via the administration of nutritional supplements or specific diets. However, the molecular signaling pathways that mediate the effect of such treatments are mostly unknown. Consequently, existing treatments are standardized or designed heuristically and able to help only some patients while failing to help others. In this paper, we propose to leverage personal health data, e.g., gathered by in-body IoBNT devices, to design more versatile and robust GBA modulation-based treatments as compared to the existing ones. To show the feasibility of our approach, we define a catalog of theoretical requirements for therapeutic GBA modulation. Then, we propose a machine learning model to verify these requirements for practical scenarios when only limited data on the GBA modulation exists. By evaluating the proposed model on several datasets, we confirm its excellent accuracy in identifying different modulators of the GBA. Finally, we utilize the proposed model to identify specific modulatory pathways that play an important role for therapeutic GBA modulation.

肠脑轴个性化医疗机器学习神经调控

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