一站式药物发现平台,打通从设计到合成的全流程
BSL: A Unified and Generalizable Multitask Learning Platform for Virtual Drug Discovery from Design to Synthesis
- 统一框架集成七项核心任务,融合生成模型与图神经网络
- 在多个数据集上达顶尖性能,对新分子结构泛化能力突出
- 已发现三类具生物活性的新药分子,适合医药研发人员使用
药物发现对保障人类健康、延长寿命及应对重大疾病具有重要意义。近年来,人工智能在生物信息学和药理学关键任务中展现出显著优势,得益于其高效的数据处理与表示能力。然而,现有计算平台多仅覆盖部分核心任务,导致工作流程碎片化、效率低下,且缺乏算法创新,对分布外(OOD)数据泛化能力差,严重制约药物发现进展。为此,我们提出百胜来(BSL),一个深度学习增强的开源虚拟药物发现平台。BSL 在统一模块化框架内整合七项核心任务,融入生成模型与图神经网络等先进技术。不仅在多个基准数据集上达到当前最优(SOTA)性能,更注重对分布外分子结构的泛化评估。与现有平台及基线方法的对比实验表明,BSL 提供了全面、可扩展且高效的虚拟药物发现解决方案,兼具算法创新与高精度预测,适用于真实药物研发。此外,BSL 成功发现 GluN1/GluN3A NMDA 受体新型调节剂,在体外电生理实验中确认三种化合物具有明确生物活性。这些结果凸显了 BSL 在加速生物医药研究与药物发现方面的潜力。平台可访问:https://www.baishenglai.net。
原文摘要 · Abstract (English)
Drug discovery is of great social significance in safeguarding human health, prolonging life, and addressing the challenges of major diseases. In recent years, artificial intelligence has demonstrated remarkable advantages in key tasks across bioinformatics and pharmacology, owing to its efficient data processing and data representation capabilities. However, most existing computational platforms cover only a subset of core tasks, leading to fragmented workflows and low efficiency. In addition, they often lack algorithmic innovation and show poor generalization to out-of-distribution (OOD) data, which greatly hinders the progress of drug discovery. To address these limitations, we propose Baishenglai (BSL), a deep learning-enhanced, open-access platform designed for virtual drug discovery. BSL integrates seven core tasks within a unified and modular framework, incorporating advanced technologies such as generative models and graph neural networks. In addition to achieving state-of-the-art (SOTA) performance on multiple benchmark datasets, the platform emphasizes evaluation mechanisms that focus on generalization to OOD molecular structures. Comparative experiments with existing platforms and baseline methods demonstrate that BSL provides a comprehensive, scalable, and effective solution for virtual drug discovery, offering both algorithmic innovation and high-precision prediction for real-world pharmaceutical research. In addition, BSL demonstrated its practical utility by discovering novel modulators of the GluN1/GluN3A NMDA receptor, successfully identifying three compounds with clear bioactivity in in-vitro electrophysiological assays. These results highlight BSL as a promising and comprehensive platform for accelerating biomedical research and drug discovery. The platform is accessible at https://www.baishenglai.net.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。