用两级级联网络精准分割心房疤痕,助力个性化射频消融治疗。
LA-CaRe-CNN: Cascading Refinement CNN for Left Atrial Scar Segmentation
- 两级3D卷积网络分步细化心房与疤痕区域
- 心房分割DSC达89.21%,疤痕分割G-DSC达91.80%
- 适用于构建患者特异性心脏数字孪生模型
心房颤动(AF)是最常见的心律失常,治疗常需进行消融术,通过局部造疤阻断异常电信号。患者特异性心脏数字孪生模型在个性化消融治疗中潜力巨大,但依赖于从延迟钆增强磁共振(LGE-MR)扫描中准确分割健康与疤痕组织。本文提出左心房级联精修卷积神经网络(LA-CaRe-CNN),通过两阶段3D端到端训练,第一阶段预测左心房,第二阶段结合原始图像信息进一步优化左心房疤痕分割。为应对训练外域的分布偏移,采用强强度与空间增强提升数据多样性。基于五折集成,该方法在左心房分割上取得89.21% DSC与1.6969 mm ASSD,在更具挑战性的左心房疤痕分割上达到64.59% DSC与91.80% G-DSC,表明其在生成患者特异性心脏数字孪生模型及个性化靶向消融治疗中的巨大潜力。
原文摘要 · Abstract (English)
Atrial fibrillation (AF) represents the most prevalent type of cardiac arrhythmia for which treatment may require patients to undergo ablation therapy. In this surgery cardiac tissues are locally scarred on purpose to prevent electrical signals from causing arrhythmia. Patient-specific cardiac digital twin models show great potential for personalized ablation therapy, however, they demand accurate semantic segmentation of healthy and scarred tissue typically obtained from late gadolinium enhanced (LGE) magnetic resonance (MR) scans. In this work we propose the Left Atrial Cascading Refinement CNN (LA-CaRe-CNN), which aims to accurately segment the left atrium as well as left atrial scar tissue from LGE MR scans. LA-CaRe-CNN is a 2-stage CNN cascade that is trained end-to-end in 3D, where Stage 1 generates a prediction for the left atrium, which is then refined in Stage 2 in conjunction with the original image information to obtain a prediction for the left atrial scar tissue. To account for domain shift towards domains unknown during training, we employ strong intensity and spatial augmentation to increase the diversity of the training dataset. Our proposed method based on a 5-fold ensemble achieves great segmentation results, namely, 89.21% DSC and 1.6969 mm ASSD for the left atrium, as well as 64.59% DSC and 91.80% G-DSC for the more challenging left atrial scar tissue. Thus, segmentations obtained through LA-CaRe-CNN show great potential for the generation of patient-specific cardiac digital twin models and downstream tasks like personalized targeted ablation therapy to treat AF.
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