arXiv:2508.04743q-bio.MNcs.LG2025-08被引 3

用量子回归网络分析阿尔茨海默病关键基因互作机制

Alz-QNet: A Quantum Regression Network for Studying Alzheimer's Gene Interactions

  • 构建量子回归网络,解析阿尔茨海默病相关基因在大脑内嗅皮层的相互作用
  • 基于GSE138852数据集,发现多个关键基因(如APP、PLD3)间的复杂调控关系
  • 为基因治疗靶点发现提供新思路,适合神经退行性疾病与量子计算交叉研究者

通过研究与阿尔茨海默病(AD)相关的关键基因,理解其分子机制仍具挑战。作为多因素疾病,需揭示基因间互作以推动诊疗进展。本文提出量子回归网络(Alz-QNet),结合前沿量子基因调控网络(QGRN)思想,解析阿尔茨海默病中关键基因(如APP、FGF14、YY1、PLD3)如何受其他核心开关基因影响。研究聚焦于早期病理变化发生的内嗅皮层(EC)微环境,利用数据库GSE138852中的遗传样本,分析了包括APP、FGF14、YY1、EGR1、GAS7、AKT3、SREBF2和PLD3在内的多个关键基因的相互作用。结果揭示了复杂的基因-基因互作网络,为理解疾病发生机制提供新视角,并有望指导潜在基因抑制剂或调节因子的发现,助力精准诊疗。

原文摘要 · Abstract (English)

Understanding the molecular-level mechanisms underpinning Alzheimer's disease (AD) by studying crucial genes associated with the disease remains a challenge. Alzheimer's, being a multifactorial disease, requires understanding the gene-gene interactions underlying it for theranostics and progress. In this article, a novel attempt has been made using a quantum regression to decode how some crucial genes in the AD Amyloid Beta Precursor Protein ($APP$), Sterol regulatory element binding transcription factor 14 ($FGF14$), Yin Yang 1 ($YY1$), and Phospholipase D Family Member 3 ($PLD3$) etc. become influenced by other prominent switching genes during disease progression, which may help in gene expression-based therapy for AD. Our proposed Quantum Regression Network (Alz-QNet) introduces a pioneering approach with insights from the state-of-the-art Quantum Gene Regulatory Networks (QGRN) to unravel the gene interactions involved in AD pathology, particularly within the Entorhinal Cortex (EC), where early pathological changes occur. Using the proposed Alz-QNet framework, we explore the interactions between key genes ($APP$, $FGF14$, $YY1$, $EGR1$, $GAS7$, $AKT3$, $SREBF2$, and $PLD3$) within the CE microenvironment of AD patients, studying genetic samples from the database $GSE138852$, all of which are believed to play a crucial role in the progression of AD. Our investigation uncovers intricate gene-gene interactions, shedding light on the potential regulatory mechanisms that underlie the pathogenesis of AD, which help us to find potential gene inhibitors or regulators for theranostics.

阿尔茨海默病量子计算基因互作生物信息学

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