用潜在空间线性建模,让脑部MRI随年龄自然演化,预测更准且可动态更新。
MRExtrap: Longitudinal Aging of Brain MRIs using Linear Modeling in Latent Space
- 在卷积自编码器的潜在空间中,用线性外推模拟脑部老化轨迹。
- 在ADNI数据集上,单次扫描预测精度超越基于GAN的基线方法。
- 支持多时间点数据融合,适合有纵向观测的个体化衰老研究。
模拟3D脑部MRI随年龄的变化,有助于揭示阿尔茨海默病等神经疾病的发展模式。现有深度学习生成模型通常从单一观测扫描预测未来图像。本文提出MRExtrap,基于观察发现:训练于脑部MRI的自编码器所生成的潜在空间中,老化轨迹近似线性。通过在潜在空间中拟合线性外推模型,并利用估计的潜变量进展率β,实现基于年龄的未来扫描预测。对于单次扫描预测,引入群体平均与个体特异性先验来建模进展率;当存在多个时间点扫描时,可通过贝叶斯后验采样灵活更新预测,实现个体化修正。在ADNI数据集上,MRExtrap准确预测老化模式,优于基于GAN的基线方法。同时验证并分析了多扫描条件下的个体进展率建模效果。结果显示,模型中的潜变量进展率与先前研究的结构萎缩速率在疾病和年龄相关老化模式上具有显著相关性。MRExtrap为基于年龄生成3D脑部MRI提供了一种简单、鲁棒的方法,尤其适用于具备多次纵向观测的场景。
原文摘要 · Abstract (English)
Simulating aging in 3D brain MRI scans can reveal disease progression patterns in neurological disorders such as Alzheimer's disease. Current deep learning-based generative models typically approach this problem by predicting future scans from a single observed scan. We investigate modeling brain aging via linear models in the latent space of convolutional autoencoders (MRExtrap). Our approach, MRExtrap, is based on our observation that autoencoders trained on brain MRIs create latent spaces where aging trajectories appear approximately linear. We train autoencoders on brain MRIs to create latent spaces, and investigate how these latent spaces allow predicting future MRIs through linear extrapolation based on age, using an estimated latent progression rate $\boldsymbolβ$. For single-scan prediction, we propose using population-averaged and subject-specific priors on linear progression rates. We also demonstrate that predictions in the presence of additional scans can be flexibly updated using Bayesian posterior sampling, providing a mechanism for subject-specific refinement. On the ADNI dataset, MRExtrap predicts aging patterns accurately and beats a GAN-based baseline for single-volume prediction of brain aging. We also demonstrate and analyze multi-scan conditioning to incorporate subject-specific progression rates. Finally, we show that the latent progression rates in MRExtrap's linear framework correlate with disease and age-based aging patterns from previously studied structural atrophy rates. MRExtrap offers a simple and robust method for the age-based generation of 3D brain MRIs, particularly valuable in scenarios with multiple longitudinal observations.
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