用隐式场重建肋骨3D结构并提取中轴线,提升医学影像稀疏数据处理能力。
RibPull: Implicit Occupancy Fields and Medial Axis Extraction for CT Ribcage Scans
- 用神经占用场建模肋骨3D形状,支持连续坐标输入与补全
- 在20个肋骨扫描上实现中轴线精准提取,优于体素方法
- 适合需要高精度几何分析的医学图像研究者
我们提出RibPull,一种结合隐式占用场与中轴线提取的方法,用于CT肋骨扫描。隐式3D表示通过连续函数有效处理稀疏和噪声数据,克服了体素网格在分辨率、拓扑保持和稀疏性处理上的局限。本工作采用神经占用场预测3D点是否位于肋骨内部,从而构建连续的3D场景表示。同时,利用拉普拉斯收缩算法提取肋骨中轴线,凸显连续坐标表示在几何操作中的优势。我们在20例来自RibSeg数据集(扩展自RibFrac)的医学扫描上验证该方法,结果表明其能更准确地恢复结构信息。代码将在发表后公开。
原文摘要 · Abstract (English)
We present RibPull, a methodology that utilizes implicit occupancy fields to bridge computational geometry and medical imaging. Implicit 3D representations use continuous functions that handle sparse and noisy data more effectively than discrete methods. While voxel grids are standard for medical imaging, they suffer from resolution limitations, topological information loss, and inefficient handling of sparsity. Coordinate functions preserve complex geometrical information and represent a better solution for sparse data representation, while allowing for further morphological operations. Implicit scene representations enable neural networks to encode entire 3D scenes within their weights. The result is a continuous function that can implicitly compesate for sparse signals and infer further information about the 3D scene by passing any combination of 3D coordinates as input to the model. In this work, we use neural occupancy fields that predict whether a 3D point lies inside or outside an object to represent CT-scanned ribcages. We also apply a Laplacian-based contraction to extract the medial axis of the ribcage, thus demonstrating a geometrical operation that benefits greatly from continuous coordinate-based 3D scene representations versus voxel-based representations. We evaluate our methodology on 20 medical scans from the RibSeg dataset, which is itself an extension of the RibFrac dataset. We will release our code upon publication.
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