arXiv:2509.02276cs.AI2025-09IJCAI被引 8

用强化学习生成可解释的药物重定位答案

Rewarding Explainability in Drug Repurposing with Knowledge Graphs

  • 用奖励机制引导AI在知识图谱中找科学解释路径
  • 在三个基准上既提高预测准确率又生成可信解释
  • 适合需要可解释性的生物医药AI研究者

知识图谱(KG)是建模复杂多关系数据、支持假设生成的强大工具,尤其适用于药物重定位等场景。然而,为使预测方法被科学界接受,不仅需高精度,还需提供有意义的科学解释。本文提出一种新方法REx,基于知识图谱中的链接预测生成科学解释。该方法采用奖励与策略机制,引导强化学习代理识别知识图谱中的解释性路径,并通过领域特定本体进一步丰富解释路径,确保解释既具有洞察力又符合已有生物医学知识。我们在三个流行的知识图谱基准上评估了该方法在药物重定位中的表现。结果表明,REx能够有效验证预测结果与生物医学知识的一致性,在预测性能上优于现有最先进方法,证明其对推动人工智能驱动的科学发现具有重要贡献。

原文摘要 · Abstract (English)

Knowledge graphs (KGs) are powerful tools for modelling complex, multi-relational data and supporting hypothesis generation, particularly in applications like drug repurposing. However, for predictive methods to gain acceptance as credible scientific tools, they must ensure not only accuracy but also the capacity to offer meaningful scientific explanations. This paper presents a novel approach REx, for generating scientific explanations based in link prediction in knowledge graphs. It employs reward and policy mechanisms that consider desirable properties of scientific explanation to guide a reinforcement learning agent in the identification of explanatory paths within a KG. The approach further enriches explanatory paths with domain-specific ontologies, ensuring that the explanations are both insightful and grounded in established biomedical knowledge. We evaluate our approach in drug repurposing using three popular knowledge graph benchmarks. The results clearly demonstrate its ability to generate explanations that validate predictive insights against biomedical knowledge and that outperform the state-of-the-art approaches in predictive performance, establishing REx as a relevant contribution to advance AI-driven scientific discovery.

知识图谱药物重定位可解释AI强化学习

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