首个胃部3D统计形状模型,可生成多样解剖结构用于手术规划。
A Statistical 3D Stomach Shape Model for Anatomical Analysis
- 通过合成数据与真实CT扫描结合,构建可参数化的胃形模型
- 在真实数据上验证,模型能准确拟合不同形态的胃部结构
- 适合医学影像、手术模拟与个性化医疗研究者使用
真实且可参数化的3D人体解剖模型在科研、诊断和手术规划中日益重要。然而,由于数据有限及方法挑战,内部器官如胃的详细建模仍受限制。本文提出一种新型管道,用于生成合成3D胃模型,能够体现已知的胃形态变异特征。基于此管道,我们构建了一个合成胃数据集,并在此基础上开发了3D统计形状模型,该模型在低维形状空间中捕捉自然解剖变异。通过半监督对齐方式,利用公开数据集中的CT网格进一步优化模型,提升其对未见解剖变异的泛化能力。在独立测试集上的评估显示模型具有鲁棒的泛化能力和高拟合精度。我们已将统计形状模型及合成数据集开源至GitLab:https://gitlab.com/Erez.Posner/stomach_pytorch,以推动后续研究。本工作首次建立胃部3D统计形状模型,可用于手术仿真、术前规划、医学教育与计算建模。通过融合合成数据生成、参数化建模与真实世界验证,该方法显著推进了器官建模发展,为个性化医疗提供了新可能。
原文摘要 · Abstract (English)
Realistic and parameterized 3D models of human anatomy have become invaluable in research, diagnostics, and surgical planning. However, the development of detailed models for internal organs, such as the stomach, has been limited by data availability and methodological challenges. In this paper, we propose a novel pipeline for the generation of synthetic 3D stomach models, enabling the creation of anatomically diverse morphologies informed by established studies on stomach shape variability. Using this pipeline, we construct a dataset of synthetic stomachs. Building on this dataset, we develop a 3D statistical shape model of the stomach, trained to capture natural anatomical variability in a low-dimensional shape space. The model is further refined using CT meshes derived from publicly available datasets through a semi-supervised alignment process, enhancing its ability to generalize to unseen anatomical variations. We evaluated the model on a held-out test set of real stomach CT scans, demonstrating robust generalization and fit accuracy. We make the statistical shape model along with the synthetic dataset publicly available on GitLab: https://gitlab.com/Erez.Posner/stomach_pytorch to facilitate further research. This work introduces the first statistical 3D shape model of the stomach, with applications ranging from surgical simulation and pre-operative planning to medical education and computational modeling. By combining synthetic data generation, parametric modeling, and real-world validation, our approach represents a significant advancement in organ modeling and opens new possibilities for personalized healthcare solutions.
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