arXiv:2509.10432q-bio.OTcs.AI2025-09

为生物医学数据制定AI就绪元数据标准,助力机器学习应用

Standards in the Preparation of Biomedical Research Metadata: A Bridge2AI Perspective

  • 建立涵盖可发现、可追溯、可解释等维度的元数据规范
  • 针对语音、基因组等多模态数据提出标准化描述框架
  • 适合从事生物医学AI研究或数据共享的团队参考

AI就绪性指数据在后续人工智能与机器学习方法中被最优且合乎伦理地使用的程度,涉及模型训练、数据分类及可解释预测。桥接人工智能(Bridge2AI)联盟定义了使生物医学数据具备AI就绪性的关键标准:数据需满足可发现(FAIR)、可追溯性、表征程度、可解释性、可持续性与可计算性,并配有伦理数据实践文档。为支持桥接人工智能计划中的四大核心挑战项目(GCs),需建立特定类型的元数据。这些项目聚焦于生成解决复杂生物医学与行为科学研究问题的AI/ML就绪数据集,开发标准化多模态数据、工具和培训资源,同时注重伦理实践。具体包括:以语音作为生物标志物、构建可解释的基因组工具、利用多元数据建模疾病轨迹,以及绘制人体内细胞与分子健康指标。本报告评估了各项目在元数据创建与标准化方面的现状,提供必要指南,并识别出程序内的差距与改进方向。新项目,包括非桥接人工智能联盟内的项目,均可借鉴其经验以提升数据的AI就绪性。

原文摘要 · Abstract (English)

AI-readiness describes the degree to which data may be optimally and ethically used for subsequent AI and Machine Learning (AI/ML) methods, where those methods may involve some combination of model training, data classification, and ethical, explainable prediction. The Bridge2AI consortium has defined the particular criteria a biomedical dataset may possess to render it AI-ready: in brief, a dataset's readiness is related to its FAIRness, provenance, degree of characterization, explainability, sustainability, and computability, in addition to its accompaniment with documentation about ethical data practices. To ensure AI-readiness and to clarify data structure and relationships within Bridge2AI's Grand Challenges (GCs), particular types of metadata are necessary. The GCs within the Bridge2AI initiative include four data-generating projects focusing on generating AI/ML-ready datasets to tackle complex biomedical and behavioral research problems. These projects develop standardized, multimodal data, tools, and training resources to support AI integration, while addressing ethical data practices. Examples include using voice as a biomarker, building interpretable genomic tools, modeling disease trajectories with diverse multimodal data, and mapping cellular and molecular health indicators across the human body. This report assesses the state of metadata creation and standardization in the Bridge2AI GCs, provides guidelines where required, and identifies gaps and areas for improvement across the program. New projects, including those outside the Bridge2AI consortium, would benefit from what we have learned about creating metadata as part of efforts to promote AI readiness.

元数据标准AI就绪生物医学FAIR原则

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