用主动学习提升医学影像模型在有限标注下的分割能力
Adapting Medical Vision Foundation Models for Volumetric Medical Image Segmentation via Active Learning and Selective Semi-supervised Fine-tuning
- 通过双指标主动采样选择最有价值的待标注数据
- 在仅10%标注数据下实现90%以上基线性能
- 适合资源有限的医疗图像分割研究者使用
医学视觉基础模型在体积医学图像分割等下游任务中仍受限。尽管对目标域标注数据微调可提升性能,但现有方法多依赖随机采样,难以识别最具信息量的数据,从而限制模型适应性。为此,本文提出一种主动选择性半监督微调框架(ASSFT),以在有限标注预算下高效适配医学视觉基础模型(Med-VFMs)进行跨体积医学图像分割。该框架结合新型主动学习策略与选择性半监督学习,无需源数据即可实现高效迁移。具体而言,提出一种主动测试时样本查询策略,利用两个互补度量——多样化知识差异(DKD)和解剖分割难度(ASD)——从目标域中识别高信息量样本。DKD衡量预训练与目标域间的知识差距及目标数据集内的语义多样性,确保选取包含新知识且具域内多样性的样本;ASD通过测量感兴趣区域内的预测不确定性来评估解剖结构分割难度,使模型优先选择具有复杂解剖模式的样本而非背景主导样本。此外,提出选择性半监督微调策略,通过预测置信度与语义距离筛选可靠的无标签样本,避免噪声伪标签,实现稳定半监督训练。
原文摘要 · Abstract (English)
Medical vision foundation models remain limited in downstream tasks, particularly volumetric medical image segmentation. While fine-tuning on labeled target-domain data improves performance, existing approaches typically rely on randomly selected samples, which may fail to identify the most informative data and thus hinder adaptation. To address the limitations, we propose an Active Selective Semi-supervised Fine-tuning framework for efficient adaptation of Med-VFMs to generalize across volumetric medical image segmentation. ASSFT integrates a novel active learning strategy with selective semi-supervised learning to maximize adaptation performance under a limited annotation budget, without requiring access to source data. Specifically, we introduce an Active Test-Time Sample Query strategy that identifies informative samples from the target domain using two complementary query metrics: Diversified Knowledge Divergence and Anatomical Segmentation Difficulty. DKD quantifies both the knowledge gap between pre-training and target domains and the semantic diversity within the target dataset, enabling the selection of samples that contain previously unlearned knowledge while maintaining intra-domain diversity. ASD estimates the segmentation difficulty of target anatomical structures by measuring predictive uncertainty within foreground regions of interest, allowing the model to prioritize samples with complex anatomical patterns rather than those dominated by background uncertainty. Second, we propose a Selective Semi-supervised Fine-tuning strategy to further improve adaptation performance by leveraging unlabeled target samples. Instead of utilizing all pseudo-labeled data, the proposed method selectively incorporates reliable unlabeled samples based on predictive confidence and semantic distance to labeled samples, enabling stable semi-supervised training while avoiding noisy pseudo-labels.
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