arXiv:2510.05183q-bio.QMcs.LG2025-10

用物理约束的自编码器,从患者参数重建动脉瘤生长时间序列。

Aneurysm Growth Time Series Reconstruction Using Physics-informed Autoencoder

  • 结合自编码器与神经网络,将患者参数映射为生长时间序列的紧凑表示。
  • 在带噪声数据下,引入物理规律约束使重建误差降低23%以上。
  • 适合临床医生用于缺乏完整生长数据的动脉瘤风险评估。

动脉瘤是人体动脉的局部膨出,破裂是美国致残和致死的主要原因。预测动脉瘤破裂依赖于对其生长历史的时间序列分析,但因生长周期长,实际数据常不完整。本文提出一种方法,直接从患者参数重建动脉瘤生长时间序列。基于[患者参数, 生长时间序列]数据对,先用自编码器提取时间序列的紧凑表征,再通过五层神经网络学习从患者参数到该表征的映射,并采用移动平均与卷积输出层显式建模时间依赖性。进一步,引入动脉瘤生长机制的物理先验知识作为优化约束,支持代数与微分形式。实验表明:当训练数据无误差时,加入物理约束对重建效果影响不大;但在存在噪声和偏差误差时,物理约束可显著提升重建精度,误差降低超23%。

原文摘要 · Abstract (English)

Arterial aneurysm (Fig.1) is a bulb-shape local expansion of human arteries, the rupture of which is a leading cause of morbidity and mortality in US. Therefore, the prediction of arterial aneurysm rupture is of great significance for aneurysm management and treatment selection. The prediction of aneurysm rupture depends on the analysis of the time series of aneurysm growth history. However, due to the long time scale of aneurysm growth, the time series of aneurysm growth is not always accessible. We here proposed a method to reconstruct the aneurysm growth time series directly from patient parameters. The prediction is based on data pairs of [patient parameters, patient aneurysm growth time history]. To obtain the mapping from patient parameters to patient aneurysm growth time history, we first apply autoencoder to obtain a compact representation of the time series for each patient. Then a mapping is learned from patient parameters to the corresponding compact representation of time series via a five-layer neural network. Moving average and convolutional output layer are implemented to explicitly taking account the time dependency of the time series. Apart from that, we also propose to use prior knowledge about the mechanism of aneurysm growth to improve the time series reconstruction results. The prior physics-based knowledge is incorporated as constraints for the optimization problem associated with autoencoder. The model can handle both algebraic and differential constraints. Our results show that including physical model information about the data will not significantly improve the time series reconstruction results if the training data is error-free. However, in the case of training data with noise and bias error, incorporating physical model constraints can significantly improve the predicted time series.

医学影像时间序列物理模型自编码器

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