arXiv:2510.12091cs.AIcond-mat.mtrl-sci2025-10被引 4

用自然语言控制聚合物模拟,让非专业用户也能高效研究复杂聚合物结构。

ToPolyAgent: AI Agents for Coarse-Grained Topological Polymer Simulations

  • 四类AI代理协作:配置、模拟、报告、工作流,实现从指令到结果的全流程自动化。
  • 支持线性、环状、刷状、星形等多类聚合物,在不同溶剂和温度条件下完成模拟。
  • 适合材料科学初学者或希望快速验证假设的研究者,降低分子模拟门槛。

我们提出ToPolyAgent,一种基于自然语言指令的多智能体AI框架,用于对拓扑聚合物进行粗粒度分子动力学(MD)模拟。通过整合大语言模型(LLMs)与领域专用计算工具,ToPolyAgent支持交互式与自主式模拟流程,涵盖线性、环状、刷状、星形聚合物及树枝状大分子等多种结构。系统包含四个由LLM驱动的智能体:配置代理生成初始聚合物-溶剂构型,模拟代理执行基于LAMMPS的MD模拟与构象分析,报告代理生成markdown格式报告,工作流代理实现端到端自动化操作。交互模式引入用户反馈循环以迭代优化,自主模式则可从详细提示中直接完成完整任务。我们在多种聚合物结构、溶剂条件、热浴设置和模拟时长下展示了其通用性。此外,通过引导其探究相互作用参数对线性聚合物构象的影响,以及接枝密度对刷状聚合物持久长度的作用,凸显其作为研究助手的潜力。该系统结合自然语言接口与严谨模拟工具,降低了复杂计算流程的使用门槛,推动了聚合物科学中的AI驱动材料发现,并为可扩展的自主多智能体科研生态奠定基础。

原文摘要 · Abstract (English)

We introduce ToPolyAgent, a multi-agent AI framework for performing coarse-grained molecular dynamics (MD) simulations of topological polymers through natural language instructions. By integrating large language models (LLMs) with domain-specific computational tools, ToPolyAgent supports both interactive and autonomous simulation workflows across diverse polymer architectures, including linear, ring, brush, and star polymers, as well as dendrimers. The system consists of four LLM-powered agents: a Config Agent for generating initial polymer-solvent configurations, a Simulation Agent for executing LAMMPS-based MD simulations and conformational analyses, a Report Agent for compiling markdown reports, and a Workflow Agent for streamlined autonomous operations. Interactive mode incorporates user feedback loops for iterative refinements, while autonomous mode enables end-to-end task execution from detailed prompts. We demonstrate ToPolyAgent's versatility through case studies involving diverse polymer architectures under varying solvent condition, thermostats, and simulation lengths. Furthermore, we highlight its potential as a research assistant by directing it to investigate the effect of interaction parameters on the linear polymer conformation, and the influence of grafting density on the persistence length of the brush polymer. By coupling natural language interfaces with rigorous simulation tools, ToPolyAgent lowers barriers to complex computational workflows and advances AI-driven materials discovery in polymer science. It lays the foundation for autonomous and extensible multi-agent scientific research ecosystems.

聚合物模拟AI科研多智能体分子动力学

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