arXiv:2511.04171cs.CVcs.AI2025-11

对比多种图像预处理方法,发现CycleGAN能显著提升病理图像配准精度。

Systematic Evaluation of Preprocessing Techniques for Accurate Image Registration in Digital Pathology

  • 用CycleGAN等颜色转换技术预处理图像,提升多模态病理图像对齐效果。
  • 在20组组织样本上测试,CycleGAN使中位目标配准误差最低。
  • 适合做病理图像分析、多染色图像融合的研究者参考。

图像配准是将多幅图像映射到同一坐标系以实现解剖结构对齐的过程。在数字病理学中,该技术支持不同染色或成像模式间的信息比较与整合,应用于生物标志物分析和组织重建。本研究系统评估了多种颜色变换技术对H&E染色图像与非线性多模态图像配准的影响。使用20对组织样本,每对经过多种预处理步骤:包括CycleGAN、Macenko、Reinhard、Vahadane颜色转换,图像翻转、对比度调整、强度归一化及去噪。所有图像均采用VALIS配准方法,先进行刚性配准,再在高低分辨率图像上分两步完成非刚性配准。通过相对目标配准误差(rTRE)评估性能,报告各方法的中位中位rTRE(MMrTRE)与中位rTRE平均值(AMrTRE)。此外,基于10个手动标注关键点进行定制化点对点评估。分别在原始与反转多模态图像下进行配准。两种场景下,CycleGAN均取得最低配准误差,其余方法误差更高。结果表明,配准前应用颜色转换可有效提升跨模态图像对齐能力,增强数字病理分析可靠性。

原文摘要 · Abstract (English)

Image registration refers to the process of spatially aligning two or more images by mapping them into a common coordinate system, so that corresponding anatomical or tissue structures are matched across images. In digital pathology, registration enables direct comparison and integration of information from different stains or imaging modalities, sup-porting applications such as biomarker analysis and tissue reconstruction. Accurate registration of images from different modalities is an essential step in digital pathology. In this study, we investigated how various color transformation techniques affect image registration between hematoxylin and eosin (H&E) stained images and non-linear multimodal images. We used a dataset of 20 tissue sample pairs, with each pair undergoing several preprocessing steps, including different color transformation (CycleGAN, Macenko, Reinhard, Vahadane), inversion, contrast adjustment, intensity normalization, and denoising. All images were registered using the VALIS registration method, which first applies rigid registration and then performs non-rigid registration in two steps on both low and high-resolution images. Registration performance was evaluated using the relative Target Registration Error (rTRE). We reported the median of median rTRE values (MMrTRE) and the average of median rTRE values (AMrTRE) for each method. In addition, we performed a custom point-based evaluation using ten manually selected key points. Registration was done separately for two scenarios, using either the original or inverted multimodal images. In both scenarios, CycleGAN color transformation achieved the lowest registration errors, while the other methods showed higher errors. These findings show that applying color transformation before registration improves alignment between images from different modalities and supports more reliable analysis in digital pathology.

图像配准病理分析颜色转换CycleGAN

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