用脑连接图谱识别精神疾病生物标志物,准确率达91.85%
Selection and Stability of Functional Connectivity Features for Classification of Brain Disorders
- 采用LASSO等方法从fMRI数据中筛选稳定的功能连接特征
- 在UCLA数据集上实现91.85%分类准确率,稳定性达0.74
- 可定位影响分类的关键脑区,适合神经疾病研究者参考
脑疾病是一类对思维、情感和行为有重大影响的神经与精神障碍,涵盖范围广泛,给个人及全球医疗系统带来巨大挑战。本研究探索可解释机器学习在脑疾病分类中的能力,基于功能磁共振成像(fMRI)数据构建的脑连接图谱(即连通组)。通过比较LASSO、Relief、ANOVA等特征选择方法,结合逻辑回归(LR)分类器,评估不同方法在区分健康对照与患者中的分类性能、所选特征的稳定性以及关键脑区的识别能力。在UCLA数据集上,最优的LASSO方法达到91.85%的分类准确率,稳定性指数为0.74,优于Relief与ANOVA。该方法能有效定位可信生物标志物,推动基于连通组的脑疾病分类研究。
原文摘要 · Abstract (English)
Brain disorders are an umbrella term for a group of neurological and psychiatric conditions that have a major effect on thinking, feeling, and acting. These conditions encompass a wide range of conditions. The illnesses in question pose significant difficulties not only for individuals, but also for healthcare systems all across the world. In this study, we explore the capability of explainable machine learning for classification of people who suffer from brain disorders. This is accomplished by the utilization of brain connection map, also referred as connectome, derived from functional magnetic resonance imaging (fMRI) data. In order to analyze features that are based on the connectome, we investigated several different feature selection procedures. These strategies included the Least Absolute Shrinkage and Selection Operator (LASSO), Relief, and Analysis of Variance (ANOVA), in addition to a logistic regression (LR) classifier. First and foremost, the purpose was to evaluate and contrast the classification accuracy of different feature selection methods in terms of distinguishing healthy controls from diseased individuals. The evaluation of the stability of the traits that were chosen was the second objective. The identification of the regions of the brain that have an effect on the classification was the third main objective. When applied to the UCLA dataset, the LASSO approach, which is our most effective strategy, produced a classification accuracy of 91.85% and a stability index of 0.74, which is greater than the results obtained by other approaches: Relief and ANOVA. These methods are effective in locating trustworthy biomarkers, which adds to the development of connectome-based classification in the context of issues that impact the brain.
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