融合临床信息的Transformer模型提升睡眠分期准确率
Transformer-Based Sleep Stage Classification Enhanced by Clinical Information
- 用Transformer+1D CNN架构处理脑电数据,融合临床元数据和专家标注事件
- 在SHHS数据集上宏平均F1达0.8031,比纯信号模型提升0.0286
- 加入呼吸暂停等事件标注效果最佳,适合临床辅助诊断场景
人工睡眠分期耗时且评分者间差异大。尽管深度学习有所进展,但多数方法仅依赖原始多导睡眠图(PSG)信号,忽略人类专家使用的上下文线索。本文提出两阶段架构:基于变压器的逐段编码器与一维CNN聚合器,并系统研究融入显式上下文的影响——包括受试者层面的临床元数据(年龄、性别、体重指数)和逐段专家标注事件(呼吸暂停、血氧下降、觉醒、周期性呼吸)。在包含8,357名受试者的睡眠心脏健康研究(SHHS)队列上,上下文融合显著提升分期准确率。相较于仅使用PSG的基线模型(宏平均F1 0.7745,微平均F1 0.8774),最终模型达到宏平均F1 0.8031,微平均F1 0.9051,其中事件标注贡献最大。值得注意的是,特征融合优于预测相同辅助标签的多任务方法。结果表明,将临床有意义特征融入学习表征可同时提升性能与可解释性,无需修改脑电电极布局或增加传感器。该发现为构建上下文感知、符合专家判断的睡眠分期系统提供了可行且可扩展的路径。
原文摘要 · Abstract (English)
Manual sleep staging from polysomnography (PSG) is labor-intensive and prone to inter-scorer variability. While recent deep learning models have advanced automated staging, most rely solely on raw PSG signals and neglect contextual cues used by human experts. We propose a two-stage architecture that combines a Transformer-based per-epoch encoder with a 1D CNN aggregator, and systematically investigates the effect of incorporating explicit context: subject-level clinical metadata (age, sex, BMI) and per-epoch expert event annotations (apneas, desaturations, arousals, periodic breathing). Using the Sleep Heart Health Study (SHHS) cohort (n=8,357), we demonstrate that contextual fusion substantially improves staging accuracy. Compared to a PSG-only baseline (macro-F1 0.7745, micro-F1 0.8774), our final model achieves macro-F1 0.8031 and micro-F1 0.9051, with event annotations contributing the largest gains. Notably, feature fusion outperforms multi-task alternatives that predict the same auxiliary labels. These results highlight that augmenting learned representations with clinically meaningful features enhances both performance and interpretability, without modifying the PSG montage or requiring additional sensors. Our findings support a practical and scalable path toward context-aware, expert-aligned sleep staging systems.
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