arXiv:2512.06949cs.CV2025-12

用图神经网络建模组织间关系,提升皮肤癌病理图像分割精度

Can We Go Beyond Visual Features? Neural Tissue Relation Modeling for Relational Graph Analysis in Non-Melanoma Skin Histology

  • 构建组织级图结构,通过消息传递融合空间与功能关系
  • 在非黑色素瘤皮肤癌数据集上,分割精度提升4.9%至31.25%
  • 适合需要结构一致性与生物可解释性的病理分析场景

组织病理图像分割对皮肤癌诊断中组织结构的划分至关重要,但建模空间上下文与组织间关系仍具挑战,尤其在重叠或形态相似区域。现有基于卷积神经网络(CNN)的方法主要依赖视觉纹理,常将组织视为独立区域,缺乏生物学上下文编码。为此,我们提出神经组织关系建模(NTRM),一种新型分割框架,通过引入组织级图神经网络增强CNN,以建模不同组织类型间的空间与功能关系。NTRM在预测区域上构建图,通过消息传递传播上下文信息,并经空间投影优化分割结果。相比以往方法,NTRM显式编码组织间依赖关系,实现边界密集区域的结构一致预测。在基准数据集Histopathology Non-Melanoma Skin Cancer Segmentation上,NTRM优于当前最优方法,Dice相似系数提升4.9%至31.25%。实验表明,关系建模为更上下文感知、可解释的病理分割提供了合理路径,优于缺乏组织结构意识的局部感受野架构。

原文摘要 · Abstract (English)

Histopathology image segmentation is essential for delineating tissue structures in skin cancer diagnostics, but modeling spatial context and inter-tissue relationships remains a challenge, especially in regions with overlapping or morphologically similar tissues. Current convolutional neural network (CNN)-based approaches operate primarily on visual texture, often treating tissues as independent regions and failing to encode biological context. To this end, we introduce Neural Tissue Relation Modeling (NTRM), a novel segmentation framework that augments CNNs with a tissue-level graph neural network to model spatial and functional relationships across tissue types. NTRM constructs a graph over predicted regions, propagates contextual information via message passing, and refines segmentation through spatial projection. Unlike prior methods, NTRM explicitly encodes inter-tissue dependencies, enabling structurally coherent predictions in boundary-dense zones. On the benchmark Histopathology Non-Melanoma Skin Cancer Segmentation Dataset, NTRM outperforms state-of-the-art methods, achieving a robust Dice similarity coefficient that is 4.9\% to 31.25\% higher than the best-performing models among the evaluated approaches. Our experiments indicate that relational modeling offers a principled path toward more context-aware and interpretable histological segmentation, compared to local receptive-field architectures that lack tissue-level structural awareness. Our code is available at https://github.com/shravan-18/NTRM.

病理分割图神经网络组织关系

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