用对比传递函数量化纳米颗粒电镜图像的分布外泛化能力
Contrast transfer functions help quantify neural network out-of-distribution generalization in HRTEM
- 基于仿真数据训练超1.2万模型,研究成像条件变化对模型影响
- 发现模型性能随成像条件偏移呈平稳下降,可预测
- 适合关注电镜图像分析泛化性的研究人员参考
神经网络虽在科学任务中表现优异,但在分布外(OOD)场景下表现不佳,尤其在实验条件变化大或真实标签难获取时。借助模拟数据可精准控制分布并获得真实信息,我们通过随机结构采样与多层透射模拟生成合成数据,训练并评估超过12,000个神经网络模型在高分辨率透射电子显微镜(HRTEM)纳米颗粒图像上的分布外泛化能力。利用HRTEM对比传递函数,构建框架以比较数据集信息量并量化分布偏移。结果表明,分割模型具有显著性能稳定性,但随着成像条件偏离训练分布会平滑且可预测地退化。最后,讨论该方法在原子结构变化等其他类型分布偏移上的局限性,并提出互补分析技术。
原文摘要 · Abstract (English)
Neural networks, while effective for tackling many challenging scientific tasks, are not known to perform well out-of-distribution (OOD), i.e., within domains which differ from their training data. Understanding neural network OOD generalization is paramount to their successful deployment in experimental workflows, especially when ground-truth knowledge about the experiment is hard to establish or experimental conditions significantly vary. With inherent access to ground-truth information and fine-grained control of underlying distributions, simulation-based data curation facilitates precise investigation of OOD generalization behavior. Here, we probe generalization with respect to imaging conditions of neural network segmentation models for high-resolution transmission electron microscopy (HRTEM) imaging of nanoparticles, training and measuring the OOD generalization of over 12,000 neural networks using synthetic data generated via random structure sampling and multislice simulation. Using the HRTEM contrast transfer function, we further develop a framework to compare information content of HRTEM datasets and quantify OOD domain shifts. We demonstrate that neural network segmentation models enjoy significant performance stability, but will smoothly and predictably worsen as imaging conditions shift from the training distribution. Lastly, we consider limitations of our approach in explaining other OOD shifts, such as of the atomic structures, and discuss complementary techniques for understanding generalization in such settings.
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