用双模型学习可解释的时间序列特征,提升医学信号分析能力
SigTime: Learning and Visually Explaining Time Series Signatures
- 用Transformer联合学习局部结构与统计特征,生成可解释的时序签名
- 在8个公开数据集和1个临床数据集上验证,分类性能显著优于基线方法
- 开发可视化系统支持多视角探索,适合医疗数据分析人员使用
理解与区分时间序列中的时间模式对科学发现和决策至关重要。例如,在生物医学研究中,从生理信号中挖掘有意义的模式可改善诊断、风险评估和患者预后。然而,现有时间序列模式发现方法存在计算复杂度高、可解释性差、难以捕捉有意义的时间结构等问题。为此,我们提出一种新型学习框架,通过互补的时间序列表示联合训练两个Transformer模型:基于形状元(shapelet)的表示以捕捉局部时间结构,传统特征工程表示以编码统计特性。所学形状元作为可解释的时序签名,能有效区分不同分类标签的时间序列。此外,我们开发了可视化分析系统SigTime,通过协调视图支持从多个角度探索时序签名,促进有用洞察生成。我们在八个公开数据集和一个专有临床数据集上对学习框架进行量化评估,并通过两个应用场景展示系统有效性:一是公开心电图(ECG)数据,二是早产劳动预测分析,均获得领域专家认可。
原文摘要 · Abstract (English)
Understanding and distinguishing temporal patterns in time series data is essential for scientific discovery and decision-making. For example, in biomedical research, uncovering meaningful patterns in physiological signals can improve diagnosis, risk assessment, and patient outcomes. However, existing methods for time series pattern discovery face major challenges, including high computational complexity, limited interpretability, and difficulty in capturing meaningful temporal structures. To address these gaps, we introduce a novel learning framework that jointly trains two Transformer models using complementary time series representations: shapelet-based representations to capture localized temporal structures and traditional feature engineering to encode statistical properties. The learned shapelets serve as interpretable signatures that differentiate time series across classification labels. Additionally, we develop a visual analytics system -- SigTIme -- with coordinated views to facilitate exploration of time series signatures from multiple perspectives, aiding in useful insights generation. We quantitatively evaluate our learning framework on eight publicly available datasets and one proprietary clinical dataset. Additionally, we demonstrate the effectiveness of our system through two usage scenarios along with the domain experts: one involving public ECG data and the other focused on preterm labor analysis.
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