用多视角MRI和深度学习非侵入预测胶质母细胞瘤甲基化状态
Multi-View MRI Approach for Classification of MGMT Methylation in Glioblastoma Patients
- 基于三视角MRI图像,利用空间关系建模提升分类精度
- 在公开数据集上达到0.81的AUC,优于现有方法
- 适合临床医生和医学影像研究者用于精准诊疗辅助
MGMT启动子甲基化状态显著影响胶质母细胞瘤(GBM)患者对化疗的响应。目前确认该状态需依赖侵入性脑组织活检。本研究探索放射基因组学技术,通过MRI扫描与深度学习模型,提出一种新的多视角方法,利用不同视角间的空间关系来判断MGMT甲基化状态。该方法不采用复杂的3D深度学习模型,避免了参数量大、收敛慢、内存占用高等问题。同时,我们提出一种新型肿瘤切片提取技术,在多个评估指标上表现优于现有方法。与先进模型对比表明,本方法具有优异性能。此外,我们发布了可复现的模型流程,推动诊断工具的透明化与稳健发展。研究展示了非侵入性识别MGMT甲基化潜力,助力GBM精准医疗进展。
原文摘要 · Abstract (English)
The presence of MGMT promoter methylation significantly affects how well chemotherapy works for patients with Glioblastoma Multiforme (GBM). Currently, confirmation of MGMT promoter methylation relies on invasive brain tumor tissue biopsies. In this study, we explore radiogenomics techniques, a promising approach in precision medicine, to identify genetic markers from medical images. Using MRI scans and deep learning models, we propose a new multi-view approach that considers spatial relationships between MRI views to detect MGMT methylation status. Importantly, our method extracts information from all three views without using a complicated 3D deep learning model, avoiding issues associated with high parameter count, slow convergence, and substantial memory demands. We also introduce a new technique for tumor slice extraction and show its superiority over existing methods based on multiple evaluation metrics. By comparing our approach to state-of-the-art models, we demonstrate the efficacy of our method. Furthermore, we share a reproducible pipeline of published models, encouraging transparency and the development of robust diagnostic tools. Our study highlights the potential of non-invasive methods for identifying MGMT promoter methylation and contributes to advancing precision medicine in GBM treatment.
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